Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1078g00001 ATGGCCCGTAGATTCGATCCACCGGAAGAATCTGAACCTCTGCCCGAGATGGCACCGGACTCTCCCTCCTCCGGTGATGACATCAATACTGCAGCTCCGTCTCCCAAGAAAAGGAAGGGGATAAAGAAGAAGGTGGTGGTAGTACCGATCGGTGACGTGGAGGGATCCAAGAGCAAAGTCGAGACGTATCCACCGTCCGATTCTTGGGCTTGGAGAAAGTACGGCCAGAAGCCTATCAAGGGGTCTCCGTATCCCAGGGGATATTACCGATGTAGCAGTTCGAAGGGTTGTCCCGCCCGGAAACAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGATCATCGTCACCTACGCTCACGACCACAACCACTCCATCCCGGCCGGCAAGCTTCACTCCGCCACCGCCACCTCCCCTTCATCCTCCTCCTCGGCCGCTGTTGCTGACGCTAACGACGGCGTACCGACCGAATCGGACTCTAAAGTCGAACCGGAGGAGAATCTCACGGTGTTCGCGAGCCATCCCGATCTAGAACTCGACGGCGACTCGGCTGTTCTGCTCGGCGACCACCATGCATTCGGATGGTTCGATGACATGGCATCCACGACGAGAGTGCTGGAAAGCCCGATCTTCGGCGGAGAGTTGGAGGATATGGCGTTGATGACGATGAGGGAGGATGAAGACGAGTCGCTGTTCGCGGATCTCGGCGAGTTGCCGGAGTGTTCGGTTGTTTTCCGGAGAAGGAATATTCCGAGATCGAGCGCGATCCAGTGCGGTAGGATCACAGGATAA 789 0.5703 MARRFDPPEESEPLPEMAPDSPSSGDDINTAAPSPKKRKGIKKKVVVVPIGDVEGSKSKVETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKIIVTYAHDHNHSIPAGKLHSATATSPSSSSSAAVADANDGVPTESDSKVEPEENLTVFASHPDLELDGDSAVLLGDHHGXFGWFDDMASTTRVLESPIFGGELEDMALMTMREDEDESLFADLGELPECSVVFRRRNIPRSSAIQCGRITG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1078g00001 263 SMART WRKY_cls 65 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1078g00001 263 Gene3D WRKY domain 52 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1078g00001 263 ProSiteProfiles WRKY domain profile. 66 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1078g00001 263 MobiDBLite consensus disorder prediction 124 160 - -
Pral1078g00001 263 Pfam WRKY DNA -binding domain 67 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1078g00001 263 MobiDBLite consensus disorder prediction 129 148 - -
Pral1078g00001 263 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 243 IPR044810 GO:0003700
Pral1078g00001 263 MobiDBLite consensus disorder prediction 1 76 - -
Pral1078g00001 263 FunFam WRKY transcription factor 65 52 126 - -
Pral1078g00001 263 SUPERFAMILY WRKY DNA-binding domain 60 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1078g00001 Pral-Chr1078 5802 8141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1078g00001 9 250 WRKY Transcription Factor Family AT3G58710 52.209 2.86e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1078g00001 WRKY 1.6e-24 CL0274