Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1071g00003 ATGGCAAAGATAAGAGCGAATTCCCAGTCTATTATCATCAATCTTGTAGCAGTAGTAACATTGGTACGGGCACCAGGCGCAATAGCCATGGCAAGTGATGGTTCAAATGCTTTGCCGGTGAAAGACAATATATTTCCAGAGTTCATAAAGTGGCACGTGTACATAGTGAATGGTCTGAGCAACAACCAGAACTTGTTCACCAGATGCAAATCCCAAGAGGATGATCTGGGGACCCACAATCTGTCTGGGGGGTCCAATCTGACGTGGAGTTTCAGGACGGAGTTCTTCCACTCCACTTTATTCTGGTGCCACCTTAGAACAGACACAGGTGTTTCTGCTGAGTTTGAGGTTTTCTGGTACGATGACCGTCTCTTCCGGAAGTGTCAATGGAAGAACTGCATCTGGGTCGCTAAAGATCAGGGGATTTACCTCACGGATTTGTCTCAGAACCGTGATGAATTACGTTATACCTGGGAGGGACATTGA 486 0.465 MAKIRANSQSIIINLVAVVTLVRAPGAIAMASDGSNALPVKDNIFPEFIKWHVYIVNGLSNNQNLFTRCKSQEDDLGTHNLSGGSNLTWSFRTEFFHSTLFWCHLRTDTGVSAEFEVFWYDDRLFRKCQWKNCIWVAKDQGIYLTDLSQNRDELRYTWEGH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1071g00003 161 PANTHER - 49 146 IPR010264 -
Pral1071g00003 161 Pfam Plant self-incompatibility protein S1 52 158 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1071g00003 Pral-Chr1071 10087 10572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1071g00003 53 131 Carbohydrate Esterase AT3G16970 34.444 1.98e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1071g00003 - - pcin:129320630 238.039