Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1070g00002 ATGGGCGGCTCAAAGGCAAACCAAGACCATCTGGGTTCGCTGATGCCTTCATCAAATCTTCAAGGCGGTTCAAGAATGGAGGGCATCAAGTTTATGAAGGAGATGACCCAGAGTAATCGTCGGGCTCTGAGCAATATCAATCAGAATATTATGGAGGCTACTCATAAGCCTTGTGTGGTCAACAGAAGAGACCCATTAGGAAGATATACAGCACAGACAGTTCAGCACTGCCCTGAAGAAACTAAAAAACTAAGCCTATTGGCTCCGAACTCCAGTTACCGGTTGGACTGTGAGATAACAGATATTGGAGAATACGAGGATGTTGGTGACAATGGAATTCCAGTGTTTGTGAAGCACACGGAAGCAATGCTGGACGAAATTGACAGATTAGAGGAAGTGGAAATGGAAGACGTGGAGGAGCCTGTTATGGACATCGATGTTAGTGATACGAAAGATCCACTAGCAGTTGTTGAATATATAGATGAGATCTACGAATTTTATAAGAAAATTGAGAATTCCAGCTGCGCCTCTCCAGATTACATGGCTGGCCAGTTTGACATCAATGAGAAGATGAGGGCTATCCTCATTGACTGGCTTATCGAGGTTCACTACAAATTCGAGCTTATGGAGGAGACATTGTACCTTACCGTCAGTCTGATAGACAGGTTCTTGGAGCGTCAGGCGGTGATCAGAAAGAAGCTTCAGTTGGTCGGTGTAACAGCCATGCTAATAGCTTGCAAATATGAGGAGGTTTCCGTCCCCACTGTTGAGGATTTTATCTTGATAACAGACAAGGCATACAAGAGGGAGGAAGTTATAAATATGGAGAAGTTAATGATGAACACGTTACAATTCAACCTGTGTGTGCCTACTCCATATGTGTTCATGAGGAGATTTCTTAAAGCAGCTCAATTTGACAAAAAGCTGGAACTCTCGTCCTCCTTCATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTCAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAGTGGACAAAGACGAGTGAATGGTATACCAATTACTCGGAAGCCCAGCTTCTAGAGTGCTCAAGAATGATGGTTACTTTCCATCAGAAGGCTGGGACTGGAAAACTCACAGGAGTCTGCAGGAAGTACAGCACGTGGAAGTATGGTTATGCCGCAAATATGAAACCAGCCCTGTTTTTGCTGGGCTCTGATTGA 1245 0.4418 MGGSKANQDHLGSLMPSSNLQGGSRMEGIKFMKEMTQSNRRALSNINQNIMEATHKPCVVNRRDPLGRYTAQTVQHCPEETKKLSLLAPNSSYRLDCEITDIGEYEDVGDNGIPVFVKHTEAMLDEIDRLEEVEMEDVEEPVMDIDVSDTKDPLAVVEYIDEIYEFYKKIENSSCASPDYMAGQFDINEKMRAILIDWLIEVHYKFELMEETLYLTVSLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVINMEKLMMNTLQFNLCVPTPYVFMRRFLKAAQFDKKLELSSSFIIELCLVEYKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEAQLLECSRMMVTFHQKAGTGKLTGVCRKYSTWKYGYAANMKPALFLLGSD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1070g00002 414 SUPERFAMILY Cyclin-like 289 405 IPR036915 -
Pral1070g00002 414 CDD CYCLIN_AtCycB-like_rpt2 290 406 - -
Pral1070g00002 414 MobiDBLite consensus disorder prediction 10 24 - -
Pral1070g00002 414 FunFam G2/mitotic-specific cyclin-1 277 402 - -
Pral1070g00002 414 Pfam Cyclin, C-terminal domain 290 405 IPR004367 -
Pral1070g00002 414 Gene3D - 162 402 - -
Pral1070g00002 414 MobiDBLite consensus disorder prediction 1 24 - -
Pral1070g00002 414 ProSitePatterns Cyclins signature. 192 223 IPR006671 -
Pral1070g00002 414 SUPERFAMILY Cyclin-like 151 288 IPR036915 -
Pral1070g00002 414 SMART Cyclin_C_2 290 407 IPR004367 -
Pral1070g00002 414 SMART cyclin_7 294 376 IPR013763 -
Pral1070g00002 414 SMART cyclin_7 197 281 IPR013763 -
Pral1070g00002 414 Pfam Cyclin, N-terminal domain 162 288 IPR006671 -
Pral1070g00002 414 PANTHER CYCLINS 128 385 IPR039361 -
Pral1070g00002 414 Gene3D - 176 288 - -
Pral1070g00002 414 CDD CYCLIN_AtCycB-like_rpt1 143 285 - -
Pral1070g00002 414 PIRSF Cyclin_A_B_D_E 106 414 IPR046965 GO:0016538|GO:0044772
Pral1070g00002 414 PIRSF Cyclin_A_B_D_E 4 90 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1070g00002 Pral-Chr1070 6153 9139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1070g00002 5 411 Core Cell Cycle Gene Families AT1G20610 56.944 4.99e-163 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1070g00002 K21777 - qsa:O6P43_011387 561.992