Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral106g00030 ATGGATTTTCAAAAGTTGAAGCAATTATTAGTTGATGATGGATCATCATCTTCATCTAGCAGCAAGAAGAAGGTGGATGGTGTGAGAGGTCCAAACAAGCAGCTTGATTTGAATTTGTTGCCAGAAGATTCAGAAGAAGAACGAGATGATGGTGATGGTGATGATGAATTTTACATTGAAATATTTGGAAGTGTTGGAACCCCTCAAGCTGCTCTGAATCAAACTGACAATGAAGTGGATGCAAATTCAAATTCAAATGGATTTGTTCTTCCTCCATTTCCTGCTTCTGGGGACAACAATGATGCTTCCATGTTCAACAACACCACAGCTTCGTCAACAACAAAAATGGTTACACCGTCCCATCCTTTTGATGACAAGAGGAGAGCTCACCATAATGACGGTTCTTCGACCAGTTCTGGCACCCCGAGGAGCTTACGCCCTCGCCGGGCACCGGAGGCAAACTGTGATCGGCGAATTTGTACAAATTACAATTGCCGGACAAGAAACACTCCCATGTGGCGTAGGGGGCCCCTAGGTCCAAAGACCCTATGCAATGCCTGCGGTATTCAGTACAAGAAGCAAGTTTCAAGCAGAGGAAGCGATCTGTTGTGA 612 0.4477 MDFQKLKQLLVDDGSSSSSSSKKKVDGVRGPNKQLDLNLLPEDSEEERDDGDGDDEFYIEIFGSVGTPQAALNQTDNEVDANSNSNGFVLPPFPASGDNNDASMFNNTTASSTTKMVTPSHPFDDKRRAHHNDGSSTSSGTPRSLRPRRAPEANCDRRICTNYNCRTRNTPMWRRGPLGPKTLCNACGIQYKKQVSSRGSDLL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral106g00030 203 PANTHER GATA TRANSCRIPTION FACTOR 67 193 - -
Pral106g00030 203 MobiDBLite consensus disorder prediction 99 119 - -
Pral106g00030 203 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 158 198 - -
Pral106g00030 203 MobiDBLite consensus disorder prediction 93 150 - -
Pral106g00030 203 Gene3D - 156 202 IPR013088 GO:0006355|GO:0008270
Pral106g00030 203 Pfam GATA zinc finger 160 194 IPR000679 GO:0006355|GO:0043565
Pral106g00030 203 CDD ZnF_GATA 159 202 IPR000679 GO:0006355|GO:0043565
Pral106g00030 203 ProSiteProfiles GATA-type zinc finger domain profile. 164 198 IPR000679 GO:0006355|GO:0043565
Pral106g00030 203 SMART GATA_3 156 202 IPR000679 GO:0006355|GO:0043565
Pral106g00030 203 MobiDBLite consensus disorder prediction 42 56 - -
Pral106g00030 203 MobiDBLite consensus disorder prediction 10 25 - -
Pral106g00030 203 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral106g00030 Pral-Chr106 240660 245947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral106g00030 127 194 C2C2-Gata Transcription Factor Family AT3G20750 42.667 2.92e-15 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral106g00030 GATA 2.9e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral106g00030 - - rcu:8267540 89.3521