Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral106g00015 ATGGCTGTACACTCAAAGCTCAGGCTTATTGGTTATTCACAAGATATTGTAGATGGGCAGCCAATTTTTGTTTCCTCGAATTGTACTCCTGTCAAGGCTTGGAGATTTGAACCTGCGGGTCATGCCTTCCATTCTGCTGCGCTCAAACTACTTGGTGTTGAGGAAGAAAATTCAGATGCTGATGATAAAAAAGTGGTTGATGATAATGAACAGAATTATTTTCCATCATCAGATTCTTACAGCAGCAAGAGTAAAAAGAAATCTGGTTCTGGAGACAAGCAACAAGATCACTATGCATTGTTGGGTTTGACTCATCTGAGATACCTTGCTACAGAGGATCAAATACGCAAAAGCTATCGTGAAACTGCTTTGAGGTATCATCCTGACAAACAGGCAGCTCTGCTTCTTGCTGAGGAGACTGAAGCTGCAAAGTTGGCGAAGAAGGATGAGATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTTTTGATTGATCCTGTGAAGAGAAGAATCTATGATTCAACAGATGAATTTGATGATGAGATTCCTACTGACTGTGCCCCACAAGACTTCTTCAAAGTGTTCGGTCCTGCATTTATGAGGAATGGAAGGTGGTCAGTTAATCAGCCTGTTCCATCTTTAGGTGATAACAACACTCCATTAAAAGATGTCGATAACTTCTATAATTTCTGGTACACCTTTAAAAGCTGGAGAGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCACAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCGAGAAAGGAAGAATCTGCAAGGATTCGTGCTCTAGTTGATAATGCTCATAAGAGGGACCCTAGAATACTGAAGAGGAAGGAAGAGGAAAAAGCTGAGAAGCAAAGAAAAAAGGAGGCTAAGTTACTTGCAAAGAGGTTGCAGGAAGAAGAAGCTGCCAGAATTGCAGAAGAGGAGAAGAGACAAAAGGAGGAGGAAGAGAAACGAGCTGCAGAAGCTGCTTCACAACAGAAGAAGTTGAAGGAGAAAGAGAAAAAGGTCTTGCGGAAAGAGCGTGCTCGTCTTCGAACACTTTCAGGACCTATTGTGTCACAAAATGTACTTGGTATATCTGAGGATGATGTAGAAAGTCTTTGTATGTCACTTGATACTGAGCAGCTGAGGTGTTTGTGTGAGAAAATGGGTGGCCTACAGATGTTAGAACAAGCAAAAGTTCTCATAGATGCACGAGATTGCCAAAAAGATGGAGAAAATAAGAAAAAAAGAAGAATCAGTGATCGACAGAATGGTTCTGTTAAGGCTAATGGTAATGCCTCACCAGGAAACTTGGAGAAGAAGGAAAAACCCTGGAGTAAAGAAGAGATTGATCTGTTAAGAAAGGCAATGGTAAAATATCCCAAAGGAACTTCACGAAGGTGGGAGGTTATTTCAGAGTACCTTGGTACTGGACGGTCCGTGGAAGAAATTATGAAGGCAACAAAAACAGTTCTCCTCCAGAAGCCTGATTCTTCCAAATCCTTTGATGCATTTCTCGAGAAAAGGAAACCTGCACAATCAATTGCATCTCCACTGACCACTAGAGCAGAATTGGAAGGGGAATCAACTCCAGCAATCTCCCAAAGTAATTCTTCCTCGACAACAAATAACTCTGAAGACTCCAGCAGCAAAATTGCCGACAACCAAGTCTCTCCTGGTTCTGCCACTGCAAATGGAGTATCCTCTAGTTCAGACCAAGATGTCTGGTCAGCCGTACAGGAGAGAGCATTGGTCCAGGCTTTGAAAGCCTTCCCAAAGGAAACTCCCCAGAGATGGGAAAGGGTTGCAACAGCTGTCCCTGGAAAGACCATGAATCAGTGCAAGAAAAAATTTGCAATGATGAAGGAAAACTTCAGAAACAAGAAAAGTGCAGCTTGA 1950 0.4221 MAVHSKLRLIGYSQDIVDGQPIFVSSNCTPVKAWRFEPAGHAFHSAALKLLGVEEENSDADDKKVVDDNEQNYFPSSDSYSSKSKKKSGSGDKQQDHYALLGLTHLRYLATEDQIRKSYRETALRYHPDKQAALLLAEETEAAKLAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPVPSLGDNNTPLKDVDNFYNFWYTFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEESARIRALVDNAHKRDPRILKRKEEEKAEKQRKKEAKLLAKRLQEEEAARIAEEEKRQKEEEEKRAAEAASQQKKLKEKEKKVLRKERARLRTLSGPIVSQNVLGISEDDVESLCMSLDTEQLRCLCEKMGGLQMLEQAKVLIDARDCQKDGENKKKRRISDRQNGSVKANGNASPGNLEKKEKPWSKEEIDLLRKAMVKYPKGTSRRWEVISEYLGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAQSIASPLTTRAELEGESTPAISQSNSSSTTNNSEDSSSKIADNQVSPGSATANGVSSSSDQDVWSAVQERALVQALKAFPKETPQRWERVATAVPGKTMNQCKKKFAMMKENFRNKKSAA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral106g00015 649 CDD SANT 593 639 IPR001005 -
Pral106g00015 649 ProSiteProfiles dnaJ domain profile. 96 178 IPR001623 -
Pral106g00015 649 Gene3D - 583 649 - -
Pral106g00015 649 MobiDBLite consensus disorder prediction 59 93 - -
Pral106g00015 649 Gene3D - 455 512 - -
Pral106g00015 649 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Pral106g00015 649 FunFam Myb family transcription factor 587 647 - -
Pral106g00015 649 MobiDBLite consensus disorder prediction 70 84 - -
Pral106g00015 649 Coils Coil 296 370 - -
Pral106g00015 649 MobiDBLite consensus disorder prediction 330 357 - -
Pral106g00015 649 Pfam DnaJ domain 96 175 IPR001623 -
Pral106g00015 649 ProSiteProfiles SANT domain profile. 588 643 IPR017884 -
Pral106g00015 649 MobiDBLite consensus disorder prediction 428 461 - -
Pral106g00015 649 PRINTS DnaJ domain signature 48 66 IPR001623 -
Pral106g00015 649 PRINTS DnaJ domain signature 119 134 IPR001623 -
Pral106g00015 649 PRINTS DnaJ domain signature 150 170 IPR001623 -
Pral106g00015 649 SMART dnaj_3 95 170 IPR001623 -
Pral106g00015 649 CDD SANT 461 503 IPR001005 -
Pral106g00015 649 SMART sant 458 511 IPR001005 -
Pral106g00015 649 SMART sant 589 641 IPR001005 -
Pral106g00015 649 Gene3D DnaJ domain 79 188 IPR036869 -
Pral106g00015 649 MobiDBLite consensus disorder prediction 530 587 - -
Pral106g00015 649 ProSiteProfiles Myb-like domain profile. 585 639 IPR001005 -
Pral106g00015 649 SUPERFAMILY Homeodomain-like 460 504 IPR009057 -
Pral106g00015 649 ProSiteProfiles Myb-like domain profile. 454 509 IPR001005 -
Pral106g00015 649 CDD DnaJ 96 167 IPR001623 -
Pral106g00015 649 Pfam Myb-like DNA-binding domain 592 637 IPR001005 -
Pral106g00015 649 MobiDBLite consensus disorder prediction 531 587 - -
Pral106g00015 649 MobiDBLite consensus disorder prediction 291 312 - -
Pral106g00015 649 SUPERFAMILY Homeodomain-like 591 646 IPR009057 -
Pral106g00015 649 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 9 648 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pral106g00015 649 SUPERFAMILY Chaperone J-domain 94 202 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral106g00015 Pral-Chr106 60300 63939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral106g00015 97 296 C2H2 Transcription Factor Family AT1G74250 28.870 4.30e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral106g00015 DnaJ 2.1e-17 CL0392