Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1059g00004 ATGGCGTTTCAGACGAGTTCTTCCCTGCTCATTATCCTCTTCGTCTCGGCTTTGCCTTCACTGTGCTTATCTTCTTCATCGAACAATTTGTTTTCTCTGTCGGTGGAGAATCCAGAACATGTCATCAAATCAAGAAATGGAAATTTCACTGCCGGGTTCTATGACGCGGGTGAGAATGCTTTTGCGTTTTCTATCTGGTTCACCGAACCTCGAGGCCAAAACTTGAGCTTCATTTGGATGGCGAATCGTGATGTATTGGTGAATGGAAAAGGCTCAACGCTCACCCTTCGAAGCAATGGAAATCTGGTGTTGAATGATGCAGGTCAGGTCGATGTTTGGTCCACGAACACAACTTCCTTGAAACCTCCACAATTGATTTTGAAAGATGATGGTAATCTCATTCTCCTTGAGGATTCTAATCATGTTGTGTGGCAAAGTTTTGATTTTCCGACAGATACACTTGTCCCTGGACAGAGGCTTACTAGACATGCCAGCCTTGTCTCCTCCAAAAGTCAGACTGACCCATCTTCTGGTTTTCACAAGTTATTTTTTGATAACGATAATGTTCTTCGACTTGTGTACGATGGACCTGAGCTTTCGAGTATTTACTGGCCACCTCCCTGGTTTCAACCTTGGCAAGTTGGTAGGTCCACCTTCAATGCAAGTCGATTTGTATTCCTCAATTTGGATGGTGAGTTCATTTCAAGTGATAATTTTACTAGTGAGACATCAGACTATGGCCTTGTGCTTCAGAGACGATTGACCATTGATAGTGATGGTAATGTTAGGGTCTATAGTCGAAGACATTGGGGAGAGAAATGGGATGTTTCATGGCAAGCTTTTTCTGCAGGTTGTAACGTTCATGGTGTTTGTGGAGAAAATAGTTTCTGCAAATATGAACCTTATACCGGTCGAACATGCTTATGTCTTCCGGGTTACAAGTTGAAAGACGAAAGCGACTCATCCGTTGGGTGTCAACCAGAGTTCAATTTGTCTTGCAATCCAGAAGATTCTGGCTTCCTACATATACCAAATGGTGATTTCTACGGGTATGACCAAGGGACTTACCTTAATGTTACATTTGATGAATGTAAGAAGGAATGTCTGAAGTTATGTAACTGCAAAGGTTTTCAATATTCACATGATGGTTACCAATTTAAATGTTACCCAAAGACCCTTTTGGTTAACGGCAATCTTTCTCCTGCTTTCGTTGGAGGTTTTCACGTGAGACTCCCTAATTCAAGCTCATTCAGTCTTCAAGAACCCGATATCAAATGTGAAATTGTTAAGGCTATAAAGCTTGAGAGAGTCTATGTCTCAAGGCACGATAGTGTTTTTGTTAAGGTGTTATTGTGGGTAGTGTTAGCAATTGGAGTCTTTGAATTTGCATGCATTTTTCTCTTCTGGTGTCTAACATGGAAAAAGTCTAGCAAGCAGCAAACTTATGATCATCTTACTGGAACTGGGTTTAGAAAATATAGCTACTCTGAGTTGAAGGAAGCAACCAGAGGTTTCAGAGAAGAGATTGGAAGGGGTGCTGGAGGAATTGTATACAAAGGTGTGCTCAAAGATGGACGAGTTGCCGCAATCAAGAGACTGAATGAAGCAAATCAAATAGAAAGCGAATTTCTCGCAGAAGTCAACTTAATAGGAAGGCTTAACCACATGAATTTGATCGATATGTGGGGGTACTGTGCAGAAGGAAAATATAGAATGTTGGTATATGAATACATGGAAAACGGCTCTTTAGCAGAAAACCTTGAATCCAACAAGTCACTTGATTGGCGAAAGAGGTATGAAATCGCTCTAGGAACAGCAAGAGGACTTGCGTATCTTCACGAAGAGTGCTTGGAGTGGGTTCTGCATTGTGACATAAAACCCCAAAACATACTCTTGGATTCGGATTATAAGCCCAAGGTTGCAGATTTTGGACTGTCAAAGCTACAAAACAGAAACGACCTCAACAATCCAAGCTTCTCAAGGATCAGAGGAACAAGGGGTTATATGGCACCAGAGTGGGTTTTCAATCTACCAATAACATCCAAGGTTGATGTCTACAGCTATGGAATTGTGGTATTAGAGATGATAACAGGAAAAAGCTTGAGGGTTGATGGACCAGATCACTCGCATCAAGGGAGGCTAGTGACTTGGGTGAGGGAGAAGAGGAACGAAGGAGACGGAATGGTATCATGGGTGGAACGAATTATGGATCCAACAGTTGAGGGAAGCTTTGACATGAAGACGATGGAGGTTTTAGTTACAGTAGCATTACAATGTGTTGTGGAAGACAGAGATGCAAGACCTTCAATGAGCCGCATAGTGGAGATGTTTCAAAGTCATGAGATTGAGTATTGA 2355 0.4191 MAFQTSSSLLIILFVSALPSLCLSSSSNNLFSLSVENPEHVIKSRNGNFTAGFYDAGENAFAFSIWFTEPRGQNLSFIWMANRDVLVNGKGSTLTLRSNGNLVLNDAGQVDVWSTNTTSLKPPQLILKDDGNLILLEDSNHVVWQSFDFPTDTLVPGQRLTRHASLVSSKSQTDPSSGFHKLFFDNDNVLRLVYDGPELSSIYWPPPWFQPWQVGRSTFNASRFVFLNLDGEFISSDNFTSETSDYGLVLQRRLTIDSDGNVRVYSRRHWGEKWDVSWQAFSAGCNVHGVCGENSFCKYEPYTGRTCLCLPGYKLKDESDSSVGCQPEFNLSCNPEDSGFLHIPNGDFYGYDQGTYLNVTFDECKKECLKLCNCKGFQYSHDGYQFKCYPKTLLVNGNLSPAFVGGFHVRLPNSSSFSLQEPDIKCEIVKAIKLERVYVSRHDSVFVKVLLWVVLAIGVFEFACIFLFWCLTWKKSSKQQTYDHLTGTGFRKYSYSELKEATRGFREEIGRGAGGIVYKGVLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGSLAENLESNKSLDWRKRYEIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYKPKVADFGLSKLQNRNDLNNPSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSLRVDGPDHSHQGRLVTWVREKRNEGDGMVSWVERIMDPTVEGSFDMKTMEVLVTVALQCVVEDRDARPSMSRIVEMFQSHEIEY 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1059g00004 784 Pfam Protein kinase domain 507 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1059g00004 784 SUPERFAMILY Protein kinase-like (PK-like) 481 777 IPR011009 -
Pral1059g00004 784 FunFam S-receptor-like serine/threonine-protein kinase 472 577 - -
Pral1059g00004 784 Gene3D - 149 276 IPR036426 -
Pral1059g00004 784 Gene3D Phosphorylase Kinase; domain 1 469 577 - -
Pral1059g00004 784 SMART blect_4 32 150 IPR001480 -
Pral1059g00004 784 ProSiteProfiles Protein kinase domain profile. 503 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1059g00004 784 Pfam S-locus glycoprotein domain 251 316 IPR000858 GO:0048544
Pral1059g00004 784 ProSiteProfiles PAN/Apple domain profile. 333 426 IPR003609 -
Pral1059g00004 784 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Pral1059g00004 784 Gene3D Transferase(Phosphotransferase) domain 1 578 783 - -
Pral1059g00004 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 205 IPR036426 -
Pral1059g00004 784 CDD B_lectin 44 150 IPR001480 -
Pral1059g00004 784 Pfam D-mannose binding lectin 77 164 IPR001480 -
Pral1059g00004 784 CDD STKc_IRAK 509 778 - -
Pral1059g00004 784 PANTHER OS07G0415500 PROTEIN 6 779 - -
Pral1059g00004 784 Gene3D - 24 148 IPR036426 -
Pral1059g00004 784 FunFam Putative receptor-like protein kinase 578 783 - -
Pral1059g00004 784 CDD PAN_AP_plant 329 412 - -
Pral1059g00004 784 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1059g00004 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pral1059g00004 784 PIRSF SRK 1 783 IPR024171 GO:0004674
Pral1059g00004 784 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Pral1059g00004 784 Pfam PAN-like domain 333 388 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1059g00004 Pral-Chr1059 60550 72325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1059g00004 432 775 Receptor kinase-like Gene Family AT3G58690 36.043 7.29e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral1059g00004 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1059g00004 - - gmx:100783758 930.628