Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1057g00003 ATGGAACCAAAAGGTGTGCTTATGCAACGGTATGAACTGGGGAGATTATTAGGCCAAGGAACCTTTGCTAAGGTCTATCATGCAAGGAACCTTGCTACTGGCATGAGTGTGGCCATCAAGATAATTGATAAAGAGAAGATTTTGAAAGTCGGGATGATTGATCAAATCAAAAGGGAAATTTCAGTGATGAGACTAGTCAGACATCCGCATGTGGTTGAGCTTTATGAGGTAATGGCCACTAAAACCAAGATTTACTTTGTCATGGAGTATGCAAAGGGTGGTGAACTCTTCCACAAGGTAGCCAAAGGAAAGCTGAAGGAGGATGTTGCCAGGAAATACTTTCAGCAACTGGTCAGTGCTGTTGACTACTGCCACAGTAGAGGAGTGTGTCATCGGGATCTAAAACCAGAAAATCTACTACTGGACGAAAATGGGAATTTGAAGGTTTCAGATTTTGGGTTAAGTGCTCTTGCTGAGACTAAGCACCAGGATGGCTTACTCCATACTACATGCGGTACCCCAGCTTATGTTGCTCCAGAAGTGATTAACAGAAAAGGATATGATGGGTCCAAAGCTGATATATGGTCATGTGGGGTGATCTTGTATGTTTTATTGGCCGGTTATCTTCCGTTCCATAATTCCAATCTGATGGAAATGTACAGGAAGATAGGCAAGGGGCAGTACAAATTTCCTAACTGGTTTGCACCGGATGTACGGCGGCTGTTGTCCAAAATCTTGGATCCTAATCCAAACACCCGGATATCAATGGACAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGATTAGAAAAGAATGTTGTCGCAGCGACCAGCGAGAAAGAACTAGCTCCTTTAGATGCTGATGGTGTATTTGGAGCTTGTGAGAATAACAGTGGTCCTGTTGCAGAGGCAAAACAAGAGCTCACCAAACCTTGTAATATGAATGCTTTCGATATCATTTCAATGTCTGCAGGTTTTGACTTGTCTGGTCTGTTTGAGGAGACTGATCACAAAAAAGAGGCACGGTTTACATCAAACAAGCCTTCTGCAATTATCATCTCTAAGTTAGAGGAAATCTGTAAGCGCCTTCGACTGAAAGTGAAGAAGAAAGGAGGTTTGTTCAAGTTGGAGGGCTCCAAGGAAGGCAGAAAAGGCGTTTTGGGTATCGATGCTGAAATCTTTGAGATCACCCCACTCTTCCATATGGTGGAGCTTAAGAAGTCGAGTGGCGATACATTGGAGTACCAGAAGCTTCTGAAAGAGGACATTAGACCAGCACTTAAAGACATAGTTTGGACCTGGCAACGAGAACCTCAGCAACTCCAGCAAGATACGGTGCTGCTGGAGCAAGATCCTTCACATGCTGCCCCATCGGAGATTGTATCACAATCAACTTCATGA 1401 0.4354 MEPKGVLMQRYELGRLLGQGTFAKVYHARNLATGMSVAIKIIDKEKILKVGMIDQIKREISVMRLVRHPHVVELYEVMATKTKIYFVMEYAKGGELFHKVAKGKLKEDVARKYFQQLVSAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRKGYDGSKADIWSCGVILYVLLAGYLPFHNSNLMEMYRKIGKGQYKFPNWFAPDVRRLLSKILDPNPNTRISMDKIMESSWFKKGLEKNVVAATSEKELAPLDADGVFGACENNSGPVAEAKQELTKPCNMNAFDIISMSAGFDLSGLFEETDHKKEARFTSNKPSAIIISKLEEICKRLRLKVKKKGGLFKLEGSKEGRKGVLGIDAEIFEITPLFHMVELKKSSGDTLEYQKLLKEDIRPALKDIVWTWQREPQQLQQDTVLLEQDPSHAAPSEIVSQSTS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1057g00003 466 Pfam NAF domain 311 369 IPR004041 GO:0007165
Pral1057g00003 466 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Pral1057g00003 466 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1057g00003 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 429 - -
Pral1057g00003 466 FunFam Non-specific serine/threonine protein kinase 3 90 - -
Pral1057g00003 466 FunFam Non-specific serine/threonine protein kinase 309 432 - -
Pral1057g00003 466 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1057g00003 466 CDD STKc_SnRK3 10 264 - -
Pral1057g00003 466 Gene3D Kinase associated domain 1, KA1 309 433 - -
Pral1057g00003 466 FunFam Non-specific serine/threonine protein kinase 2 286 - -
Pral1057g00003 466 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Pral1057g00003 466 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1057g00003 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pral1057g00003 466 SUPERFAMILY Protein kinase-like (PK-like) 7 266 IPR011009 -
Pral1057g00003 466 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Pral1057g00003 466 CDD CIPK_C 315 428 - -
Pral1057g00003 466 Gene3D Transferase(Phosphotransferase) domain 1 91 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1057g00003 Pral-Chr1057 40839 42887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1057g00003 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 67.544 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral1057g00003 Pkinase 1.1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1057g00003 K07198 - gmx:100815651 757.673