Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1050g00003 ATGGAAGTTCTTGGATGTGTGTCAAGCACCCTAGGCTTGTGTTGCTGTCTACATGAAGTAATTAGAGAAAATTATAAACACTTCAGAGCATCCAGGAGGAGTATTCAACAACTGGATAATTCGAGGCAAGAGTTGGATGCTCGTAAAAGAGATGTTGAACATGAAGTAAATCGATTGTGCAGTCAAAACAGAGCACAGCCAACAAATCTATGTAATTTCTGGTTTGAGAAAGTTGATGGGGTAAAGACAGAAGTTAACAAGCTCTTGGATGAAAATGGCTCACATAGAGGATGCTGTTTCATTTGTTCAAGAATCAAAATGGGGAAGCTTATTGAGAAGAAGATTAGAGATATTAATGAACTTCTAGATCATGTTCCACCTTTGGATCATTTAATTGTTCCTATAAACAAGGTTGGTGATGTTTTGTCTGCAACACCAATGGTGGAATATGAAACACATAAACAAATTCTTCTGAAGATTGGGGAATTCCTACTTGACAAAAAAGTCCGAAGGATTGGTGTCTGGGGAATCGGAGGAGCAGGTAAAACAACTATCATGTCAGAGATTCACAACCGCCTAGTGAAAGGAAGGAGTCAATTTAATTGCATTATTTGGGTGGAAGCGTCAAAGGATCCAAGAAAGGTGCAACAAGATATAGCTAGGAGATTAGGTTTGATTTTTCAAGATGCTGATGATGAAAGAGCAAGAGCTTCTAAATTATTAGAAGCTTTTGATAGGAAGAAGACATTTGCACTGATTTTGGATGAGGTTTGGGAGCCACTCTCTATTGAAGAAGTTGGAATTCCTTTTCCAACAGCAGAGAATGGTTCTAAATTAGTGATAATAACTCGAAGCCGTACAGTGTGCAAAGACATGGAAACAGACAAGGATGTCGAAGTGAAACTTCTTCCAGAGAATGAAGCATGGAATCTCTTCAATGACAAAGCTGGGGAACTTGTGCCATCAGATCCAAATGTACAATCAATTGCAATGGAAGTGGCGAAACAATGCTGTGGTTTGCCTCTAGCTATTGTTACAGTTGGGCGTGCATTGAGAAATACAGCAGATATAAGAGAGTGGGAGGATGCATTACAAGAGTTAAGAACTTCAACTACTGGTATTCACAACTTTGAGGAAGTAGTATATTCTCGTTTGAAGTTGAGCTATTCAAAACTAGAGGATGATGCAAGGCGGTATTGCTTTCTGTTTTGTGCTTTATACCCAAAAGGTCATCTAATTGATGAGAATGAATTGATTAATTACTGGGTATGGGAAGATTTATTAGGTGGCGGAAGCATGGCCAAGATGAAACGAGAGGGGCAAAAGATTATACGCCAATTAATATCTGCTTGCTTGTTGGAATTAAAAATTGGGAATGGGGTGAGATATGTGAAATTGCATGATTTGATAAGAGATATGGCCCTCACAATCATGAGTACAAAGCGTAGATGCATCGTGAAAGCTAGCATGGGACAAGTAAAACTGCCGCCCCCTCAGGAATGGAAAGATGTTCAGTGGGCATCATTGATGCGAAATGACGTGAAATATATAGGATTCAATCCAATCTGTCCCAGACTCACTTCTTTACTCCTTCAATGCAACTCATTTGAACAAAATATATCAGATGACTTCTTTGACAATATGCAAGGGCTAAAAGTTCTTGATCTCTCCAATACTGGGATCAGTGCTCTGCCTATGTCTCTTTCAGATTTGAAGAATCTACGTGCCTTGATATGTAGCCAATGTTGGAATCTTATTCGTGTTCCTTCTTTAGCGAGGCTCACAAAATTGGAGTATTTAGATTTTTCAGTTTCTAGAAGCTTGACAGAACTCCCAGAAGGGATGGAACATTTGACCAGTCTGAGACACCTGGATTTCTCCTTCACATGCGTCCAAAGCTTAGGAGCTGGACTCTTGTCCAAATTTACTCTTCTAGAGGAGTTGTTGATTCTGGCTATGTGA 1962 0.395 MEVLGCVSSTLGLCCCLHEVIRENYKHFRASRRSIQQLDNSRQELDARKRDVEHEVNRLCSQNRAQPTNLCNFWFEKVDGVKTEVNKLLDENGSHRGCCFICSRIKMGKLIEKKIRDINELLDHVPPLDHLIVPINKVGDVLSATPMVEYETHKQILLKIGEFLLDKKVRRIGVWGIGGAGKTTIMSEIHNRLVKGRSQFNCIIWVEASKDPRKVQQDIARRLGLIFQDADDERARASKLLEAFDRKKTFALILDEVWEPLSIEEVGIPFPTAENGSKLVIITRSRTVCKDMETDKDVEVKLLPENEAWNLFNDKAGELVPSDPNVQSIAMEVAKQCCGLPLAIVTVGRALRNTADIREWEDALQELRTSTTGIHNFEEVVYSRLKLSYSKLEDDARRYCFLFCALYPKGHLIDENELINYWVWEDLLGGGSMAKMKREGQKIIRQLISACLLELKIGNGVRYVKLHDLIRDMALTIMSTKRRCIVKASMGQVKLPPPQEWKDVQWASLMRNDVKYIGFNPICPRLTSLLLQCNSFEQNISDDFFDNMQGLKVLDLSNTGISALPMSLSDLKNLRALICSQCWNLIRVPSLARLTKLEYLDFSVSRSLTELPEGMEHLTSLRHLDFSFTCVQSLGAGLLSKFTLLEELLILAM 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1050g00003 653 Gene3D - 303 388 IPR042197 -
Pral1050g00003 653 SUPERFAMILY L domain-like 466 649 - -
Pral1050g00003 653 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
Pral1050g00003 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 404 IPR027417 -
Pral1050g00003 653 Gene3D Ribonuclease Inhibitor 477 651 IPR032675 -
Pral1050g00003 653 Gene3D - 389 476 IPR036388 -
Pral1050g00003 653 FunFam Probable disease resistance protein At1g61300 134 297 - -
Pral1050g00003 653 Coils Coil 35 62 - -
Pral1050g00003 653 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 631 - -
Pral1050g00003 653 PRINTS Disease resistance protein signature 337 351 - -
Pral1050g00003 653 PRINTS Disease resistance protein signature 171 186 - -
Pral1050g00003 653 PRINTS Disease resistance protein signature 546 562 - -
Pral1050g00003 653 PRINTS Disease resistance protein signature 244 258 - -
Pral1050g00003 653 FunFam Probable disease resistance protein At1g63360 389 476 - -
Pral1050g00003 653 Gene3D - 144 301 IPR027417 -
Pral1050g00003 653 FunFam Probable disease resistance protein At5g66910 302 388 - -
Pral1050g00003 653 Pfam Leucine rich repeat 524 578 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1050g00003 Pral-Chr1050 87966 90034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1050g00003 169 589 WRKY Transcription Factor Family AT5G45050 25.000 2.57e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1050g00003 K13459 - pcin:129285546 855.899