Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1050g00002 ATGGAAGTTTTTGGATGTGTGTCAAGCACCATAGGCTTGTGTTGCTCTCTGCATGAAATAATTAGAGAAAATTATAAACACTGGAGAGCATCCAAGGGGAAGATTCAGCGGCTGAATAATTTGATGAAAAAGTTGGATGCTCGTCAACAAGATGTTGAATATGAACTAAATCAATTATGGCATCTAAAAGGGGCAGAACGAACACATGAATGTAATTTATGGTTTGAGCACGTTGATCGGGCAAGAACAGAATTTAACAGCCTCCTGGATGAAAATGGCCCCCATAGACCAAAAGGATGCTGTTTCATTTGTTCAAGAGTTAAGTTGGGGAAACTTGTTGAGAAAAAGATAGGAGATATTACCGAACTTCTAGATGATGTTCCAGATTTAGAGGATTTAATTGTTGTCCCTCGAAACAAGAGAGGTGATGTTTTGTCTGCAACACCAATGGTGGAATATGAAACACATAAACAAATCTGTATGGAGATTTGGGGATTCCTACTCGACAAAAAAACCAGAAGGATTGGTGTTTGGGGAATGGGAGGGGCAGGTAAAACAACTATCATGTCAGAGATTTATAGCCGACTATTGAAAGGAAGGAGTCAATTTAATTGCATTATTTGGGTGGAAGCATCAAAGGATCCAAAAAAGGTGCGACAAGATATAGCTTTGAGATTAAATTTGACTTTTCTGGCTTCTGATGATGAAAGAGGAAGAGCTTCAAGATTATTAGAAGCTTTTAATAGGAAGCAGCCATTTGTACTGATTCTGGATGAGGTTTGGGAACCACTCTCTATCGAAGAAGTTGGAATTCCTTTTCCAACAGCAGAGAATGGTTGTAAATTAGTTATAATAACTCGAAGCCGTACTGTGTGCAGAGACATGGAAACAGACAAGGATGTCGAAGTGAAACTTCTTTCAGAGGATGAAGCATGGAATCTCTTCAATGACAAAACTGGGAAACTTGTGCAATCAGATCCAGATGTACAACCAATTGCAATGGAAGTGGCGAAACAATGTTGTGGTTTGCCTCTAGCTATTGTTATAGTTGGGCGTGCGTTAAGAAACACAACCGATATAAGAGAGTGGGAGGATGCATTAGAACAGCTAAGAACTTCAAATATTGGTATTCACAACTTTGAAGTAGTATGTTCTCGTTTGAAGTTGAGCTATTCAAAACTAGAAGATGATGCAAGGAGGTATTGCTTTCTGTTTTGTGCTTTATACCCAAAAGGTCATCTAATTAATGAGAATGAATTGATTAATTATTGGGTATGGGAAGATTTATTGGGTGGTGGAAGCATGGCCGAGATGAAACGAAAGGGGCAAAATGTTATACGTGAGTTGATATCTGCTTGCTTGTTGGAATTAAAAATTGAGAAGGGGGTGAGATGTGTGAAATTGCACGATTTGATAAGAGATATGGCCCTCACAATCATGAGTACAAAGCCTAGATGCATTGTGAAAGCTGGCATGGGACAAGTAAAACTGCCGCCGCCTCAAGAATGGAAAGAAGATGTTCAGTGGGCATCATTGATGAGAAATGACGTGAAATATACAGGCTTCAGTCCAAGGTGTCCCAGACTCACTTCTTTACTCCTTCAATATAACTCATTTGAAAAAAATATATCGGATGACTTCTTTGACAATATGCAAGGGCTGATAGTTCTTGATCTCTCCTATAGTGGGATTAGTGCTTTGCCTATGTCTCTTTCAGATTTGAAGAATCTAAGTGCCTTGATATGTAACCAATGTTGGAATCTTGTTTATGTTCCTTCTTTAGCAAGGCTCACAAAATTGGAGTATTTAGATTTTTCACTTTCTGGATCGTTGACAGAACTTCCAGAAGGGATGGAACATTTGACCAATCTGAGACACTTGGATTTCTCCAGGTCATCCGTCCAAAACTTAGGAGCTGGAGTCTTGTCCAAATTTACTCTTCTAGAGGAGTTGTTGATTCTGGATTCGCCTATGATTCTAGTTCTACTTGACATTGGAGCTTATAGAAGAATTGTTAAACGTCTCCCGTTTTCTCAAATGAAGGAATTCAAGCTTGTCGTTGGGTCTCTAGACGAAGATGAAACTTCACTATTATTAGAGAGAACTAGTTTAGCAATAGATATGGGAGAGAAACATGGAGGAGGGAACCTTTCAGAAGCGGAGATCACCGAATTGATTCCGACTAATGTCATGGAGTTAGTAATTCAGAATTCTGATCGTACCATCAAACGCTTGTCTTTGCACTTAGTGGATGCAATGTGCTTGAAAACTTGCCATATAGAACGGTGTTTCCAGATGGAATGCATTCTGGAAAGTGAGGAGAACAATTTGTCACAGTTAGAGATAATGAGACTATATGATTTGCCGCGCTTGAGGATGATTTGCGGGGAAGCTGTGATACCAGGTACTCTAAAGAACCTGAAGAGTATTCATGTTGAAGGATGTGACTCACTGAAATTTCTGTTCCAAAAGCAGCTCATCCTTGAACTCAAAAGTCTTGAAGTAATTAGCGTCCTTAATTGCCCAGAAGTGGAAGAAATTATTGAAGGAGAGAGGAATACAAATGCTGAAGGCAGCAGCCATGCAGCCGAAGTGATCCTTCCAAAATTGATGACCTTGAAATTGCATTATTTAGAAAACCTGAAAAGCATATACAATGGGCACATTCAATGTGATTCTCTACGCACCATTGAAGTTGGTAGCTGCAAAGCTCTAAAGAAATTGCCTCTGGGTCTGTTCGGCATAGAGGAAGGTCAGCAAATATCACCATCAACTACTACTCTTGAACAAATATCATGTGAAACAGAGTGGTGGGAATCACTGCAGTGGGACCAACCGCAGGCTAAGCATCTCCTTCAACCATACCTTGTCCATCCTGGTGGCAGGGACAGGTTTGCTCCAAGTAGCAGTCATACGGCGTGA 2922 0.4008 MEVFGCVSSTIGLCCSLHEIIRENYKHWRASKGKIQRLNNLMKKLDARQQDVEYELNQLWHLKGAERTHECNLWFEHVDRARTEFNSLLDENGPHRPKGCCFICSRVKLGKLVEKKIGDITELLDDVPDLEDLIVVPRNKRGDVLSATPMVEYETHKQICMEIWGFLLDKKTRRIGVWGMGGAGKTTIMSEIYSRLLKGRSQFNCIIWVEASKDPKKVRQDIALRLNLTFLASDDERGRASRLLEAFNRKQPFVLILDEVWEPLSIEEVGIPFPTAENGCKLVIITRSRTVCRDMETDKDVEVKLLSEDEAWNLFNDKTGKLVQSDPDVQPIAMEVAKQCCGLPLAIVIVGRALRNTTDIREWEDALEQLRTSNIGIHNFEVVCSRLKLSYSKLEDDARRYCFLFCALYPKGHLINENELINYWVWEDLLGGGSMAEMKRKGQNVIRELISACLLELKIEKGVRCVKLHDLIRDMALTIMSTKPRCIVKAGMGQVKLPPPQEWKEDVQWASLMRNDVKYTGFSPRCPRLTSLLLQYNSFEKNISDDFFDNMQGLIVLDLSYSGISALPMSLSDLKNLSALICNQCWNLVYVPSLARLTKLEYLDFSLSGSLTELPEGMEHLTNLRHLDFSRSSVQNLGAGVLSKFTLLEELLILDSPMILVLLDIGAYRRIVKRLPFSQMKEFKLVVGSLDEDETSLLLERTSLAIDMGEKHGGGNLSEAEITELIPTNVMELVIQNSDRTIKRLSLHLVDAMCLKTCHIERCFQMECILESEENNLSQLEIMRLYDLPRLRMICGEAVIPGTLKNLKSIHVEGCDSLKFLFQKQLILELKSLEVISVLNCPEVEEIIEGERNTNAEGSSHAAEVILPKLMTLKLHYLENLKSIYNGHIQCDSLRTIEVGSCKALKKLPLGLFGIEEGQQISPSTTTLEQISCETEWWESLQWDQPQAKHLLQPYLVHPGGRDRFAPSSSHTA 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1050g00002 973 Gene3D - 391 478 IPR036388 -
Pral1050g00002 973 SUPERFAMILY L domain-like 463 929 - -
Pral1050g00002 973 Pfam NB-ARC domain 161 392 IPR002182 GO:0043531
Pral1050g00002 973 Pfam Leucine rich repeat 527 580 IPR001611 GO:0005515
Pral1050g00002 973 FunFam Probable disease resistance protein At1g61300 145 300 - -
Pral1050g00002 973 Gene3D Ribonuclease Inhibitor 494 668 IPR032675 -
Pral1050g00002 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 406 IPR027417 -
Pral1050g00002 973 FunFam Probable disease resistance protein At1g63360 391 478 - -
Pral1050g00002 973 Gene3D Ribonuclease Inhibitor 716 932 IPR032675 -
Pral1050g00002 973 Coils Coil 35 55 - -
Pral1050g00002 973 PRINTS Disease resistance protein signature 340 354 - -
Pral1050g00002 973 PRINTS Disease resistance protein signature 247 261 - -
Pral1050g00002 973 PRINTS Disease resistance protein signature 595 611 - -
Pral1050g00002 973 PRINTS Disease resistance protein signature 174 189 - -
Pral1050g00002 973 Gene3D - 305 390 IPR042197 -
Pral1050g00002 973 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 923 - -
Pral1050g00002 973 Gene3D - 143 304 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1050g00002 Pral-Chr1050 32383 37829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1050g00002 173 592 WRKY Transcription Factor Family AT5G45050 23.963 1.51e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1050g00002 K13459 - pcin:129285546 1181.78