Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1050g00001 ATGGATGAAAATGGTCAGTACAGATCAACTAAATGTTGCTGTTTCATTTGTTCAAGAATCAAGTTGGGGAAACTTATTGAGGAGAAGATCAGAGATATTCATGAACTTCTAGAGAATGTCCCACATTTAGAGGATTCAATTGCTATTCCTGTAAACAAGAGAGGTGGTGTTCTAAGAATTGGTGTTTGGGGGATGGGAGGAGAGGGTAAAACAACAATCATGTCAGAGATTCACAACTGCCTAGTGAAAGGAAATAGTCTATACAATTGCATTATTTGGGTAGTAGCATCAAACGATCTAAATAAGGTGCAACAAGATATAGCTGTGAAGTTAGGTTTGAACTTTAATGAAACTGATGACCAAAAAGCAAGAGCTTCAAAATTGTTAGAAACTTTTAATAGGAGGAAGACATTTGCACTGATTTTAGATGATGTTTGGGAACCATTCTCTATAGAAGAAGTTGGAATTCCTGTGCTAACAACAGAGAATGGTTGTAAATTAGTAATAATAACTCGAAGCCGTATAGTGTGCAGAGACATGGAAAGAGAAGAGGATGTTGAATTGAAACTTCTTTTAGAGGATGAAGCATGGAATCTCTTCAAGGACAAAGCTGGGGAACTTGTACTATCAGATCTGGATGTACAATCAATTGTAATGGAAGCGGTGAAACAGTGTTGTGGTTTGCCTCTAGCTATTGTTGCAGTTGGACGTGCATTAAGAAACACAACTGATATAATAGAGCGGGTGAATGCATTAGAAGAGTTCAAAAGGTCAAGTATTGATATATACAACGTTGACGAAGTATTGCGTTCTCGTTTGAAGTTGAGCTATTCGAAACTAAAGAATGATGCAAGGAGAACTTACTTTCTGTTTTGTGCTTTATACTCAAAAGGTCATCTAATTGAAGAGAATGAATTGATTAATTATTGGGTGTGGGAAGATTTACTGGGTGGTGTAAGCATGGTCGAGATGAAACGAAAGGGGCAAATGATTGTATGTGAGTTGATATCTGCTTGCTTGTGA 1023 0.3715 MDENGQYRSTKCCCFICSRIKLGKLIEEKIRDIHELLENVPHLEDSIAIPVNKRGGVLRIGVWGMGGEGKTTIMSEIHNCLVKGNSLYNCIIWVVASNDLNKVQQDIAVKLGLNFNETDDQKARASKLLETFNRRKTFALILDDVWEPFSIEEVGIPVLTTENGCKLVIITRSRIVCRDMEREEDVELKLLLEDEAWNLFKDKAGELVLSDLDVQSIVMEAVKQCCGLPLAIVAVGRALRNTTDIIERVNALEEFKRSSIDIYNVDEVLRSRLKLSYSKLKNDARRTYFLFCALYSKGHLIEENELINYWVWEDLLGGVSMVEMKRKGQMIVCELISACL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1050g00001 340 Pfam NB-ARC domain 59 278 IPR002182 GO:0043531
Pral1050g00001 340 PRINTS Disease resistance protein signature 225 239 - -
Pral1050g00001 340 PRINTS Disease resistance protein signature 59 74 - -
Pral1050g00001 340 PRINTS Disease resistance protein signature 132 146 - -
Pral1050g00001 340 Gene3D - 191 281 IPR042197 -
Pral1050g00001 340 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 11 340 - -
Pral1050g00001 340 FunFam Probable disease resistance protein At1g61300 47 185 - -
Pral1050g00001 340 Gene3D - 25 189 IPR027417 -
Pral1050g00001 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 291 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1050g00001 Pral-Chr1050 1182 2288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1050g00001 51 298 WRKY Transcription Factor Family AT5G45050 27.626 4.30e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1050g00001 K13459 - pcin:129285546 433.721