Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1048g00008 ATGATGAGCGTGAAGCAGAGGATCATTCAGATGGCAAGGAAGTGGCAGAAAAGGGCTGCCAGCGGGAGAATTTCGTATCCAGGTGGAAGGGACTCATCCGATCATGATGGGAATGGCTGGGCAGCAAATAAGGGGCACTTCGTAGTATACAGTACGGATCGGAAGCGATTTGTGGTTCCCATAGAATATCTGAGGAGGAAGGTGGTGAAGGAACTGCTGAGATTGTCGGAGGAAGAGTTTGGACTGGCAAGGAATGGACCCATTACGCTGCCAATCGATGGCACCATGTTGGAGTACGTCATGTCGTTAGTGGGAGAACGTGTGCCTGAAGACGTAGAGAAGGCTTTGATCTCTTTCTCTACCATGTCTACGTGCCACGCCCTCCCCTGCTCTCCTCATCATCCTCTTCTCCTCACACGACAACCTACCATCTACGGCTTTTGA 444 0.5113 MMSVKQRIIQMARKWQKRAASGRISYPGGRDSSDHDGNGWAANKGHFVVYSTDRKRFVVPIEYLRRKVVKELLRLSEEEFGLARNGPITLPIDGTMLEYVMSLVGERVPEDVEKALISFSTMSTCHALPCSPHHPLLLTRQPTIYGF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1048g00008 147 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 131 IPR003676 GO:0009733
Pral1048g00008 147 Pfam Auxin responsive protein 7 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1048g00008 Pral-Chr1048 48735 49178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1048g00008 7 104 Calmodulin-binding Proteins AT4G34750 33.333 4.50e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1048g00008 - - ahf:112769442 134.806