Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1046g00010 ATGGCGGAGGATCGGAACGGTGATGGCAATGAGGTAAGTGATTATACTTCGGAGGACGAAGGCACCGAGGACTACAGACGAGGAGGTTATCACGCCGTTCGAATTGGTGACACTTTCAAAAATGGGTGCTACGTGGCGCAAAGCAAACTCGGCTGGGGTCATTTTTCTACTGTCTGGCTCGCTTGGGATACCCAGAGATCGCGTTATGTAGCCTTAAAAATTCAAAAGAGTGCCCAGCACTACACCGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAAGGGGATTTGGATGACAAGAAAAGTGTCGTTAAGCTTTTGGATCACTTCAAGCATTCAGGACCTAATGGCCAGCATGTGTGTATGGTTTTTGAATTCTTGGGCGATAATCTGCTGACCCTTATAAAGTATAGTGATTACCGGGGGATTCCTATCTCATTGGTTAAAGAAATTTGTTTCCATATTCTGGTGGGATTGGATTACTTGCATCGTGAGCTATCTGTAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCAATGATAGATCCATCCAAAGATCCTAGAAAATCAGGTGTTCCGCTTATCCTTCCAAATACCAAGGATAAGGCCATTTCCAAACATGGGGCCGCAAAAGACAGTAATAGTTCAAAAGGGGATTTGACCAGGAACCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAGGCTGCTCAAAGTTGTGTTGAGAAGGAGAGTCCCAAGGAAGGTGAAGAGGATTCTAAACCACCTGAAGTAAAAGATTGTGGTGATGATGGGGAACTGATTGTGGAATCTTTTGAAGATAAATCTAGTAGTCTTGTAACCAAAGATGAATCAATTGAACTTGTTGAAACCAAGGACATCCCAAAAGGTATTCATGGTCAACTGAGAGTTAGTCGTTCCATGAAAAAAAAGTTGCTTGCTGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGAAATGCCTGTTGGACTTATAAGCAATTCACGAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGGTGCAAATATTCAACTCCGGCTGATTTATGGTCTTTTGCTTGCATTTGCTTTGAGCTTTCCACAGGTGATGTTCTTTTTGATCCCCACAGTGGTGACAACTATTCAAGGGATGAGGATCATTTGGCATTGATGATGGAACTTCTTGGAATGATGCCTCGCAAGATTGCTCTAGGCGGTCGCTATTCTCAAGAGTTTTTTAATAGACATGGTGATTTAAGGCACATCCGCCGGTTGCGTTTCTGGCCTCTTAGTAAGGTGCTGATGGAGAAGTATGATTTTGGTGAGCAAGATGCAAATGACATGGCTGACTTCCTTGTTCCGATGCTTGATTTTACCCCCGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATCTCTGCAGGTCCTCGGACTCTTGAACCCTCAGTGACTACTGTCCAGTCTGATGCCACAGACAAGGTAGTGCCTGAAAAGATGAAGGAAAAGGCTGAGTTGGGGGCAGTTGAAGCTGGTGTGCGGAATATAACTATTGATGGATCTCCAAAGGCACTCAAAGATTTATAG 1623 0.4338 MAEDRNGDGNEVSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGCYVAQSKLGWGHFSTVWLAWDTQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKSVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPISLVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSMIDPSKDPRKSGVPLILPNTKDKAISKHGAAKDSNSSKGDLTRNQKKKLRKKAKKAAQSCVEKESPKEGEEDSKPPEVKDCGDDGELIVESFEDKSSSLVTKDESIELVETKDIPKGIHGQLRVSRSMKKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGCKYSTPADLWSFACICFELSTGDVLFDPHSGDNYSRDEDHLALMMELLGMMPRKIALGGRYSQEFFNRHGDLRHIRRLRFWPLSKVLMEKYDFGEQDANDMADFLVPMLDFTPEKRPTAAQCLNHPWISAGPRTLEPSVTTVQSDATDKVVPEKMKEKAELGAVEAGVRNITIDGSPKALKDL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1046g00010 540 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Pral1046g00010 540 MobiDBLite consensus disorder prediction 1 23 - -
Pral1046g00010 540 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 15 499 - -
Pral1046g00010 540 MobiDBLite consensus disorder prediction 209 266 - -
Pral1046g00010 540 SUPERFAMILY Protein kinase-like (PK-like) 40 496 IPR011009 -
Pral1046g00010 540 MobiDBLite consensus disorder prediction 240 266 - -
Pral1046g00010 540 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1046g00010 540 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1046g00010 540 CDD STKc_SRPK 33 485 - -
Pral1046g00010 540 FunFam CMGC/SRPK protein kinase 30 129 - -
Pral1046g00010 540 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Pral1046g00010 540 Coils Coil 540 540 - -
Pral1046g00010 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pral1046g00010 540 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Pral1046g00010 540 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1046g00010 540 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1046g00010 540 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1046g00010 Pral-Chr1046 46256 50002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1046g00010 1 535 EF-hand Containing Proteins AT5G22840 66.912 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pral1046g00010 Pkinase 3.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1046g00010 K08832 - gmx:100791829 865.144