Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1045g00001 ATGAAAGCGGGATTTGAGGTGATTCATGGCGATTTCAACATGATCAGACCACATCATATGCATGAATCTTGGGACTACCCGAATAATGTTGGGCTGTCTTCATCAGCTGCAACATCATCATCGATCCAATTTTCAAAGCCACCACCCATTGACACTACCACTCACAATACTGTAAACTTGGCAACAAACGAGTTTTCAGATTGGGTGGAGCATATTACCAAACACCTTGTGGACGACTTGCCAGCTGAAACCACATCTGATCATAACTTTCTTCCTTATAATAACCATCACCAAACAAGGTCGTATTCTCAGGACAACCTCGTAGGCACAGTAGTTTCACCTGTTACGTACCCTAGAAAAGGTCCCTTCATCAACAACGACCTGCAAATTCAAATTCAAACAAATCCAGTAGATCATCACGACCAAAACAATGATGGTGGGTTGCACCTTTTAACACTTCTAATGGAGTGTGCAGTAGCGATCTCAGTGGATAACCTCAGTGAAGCACACAGGGTGTTGCTTGAGCTTACCCAAGTGGTCTCACCTTACAAGCCGTCCTGTGCAGAGCGTATTGTTGCCTACTTTGCTAAAGCCATGTCTAGCAGAGTAATGAACTCGATGCTCGGAGTATTTTCCCCTCTGATTGATCATAGGAGCATTCACTCTTCATTCCAAGTGTTCAACAACGTTTCGCCTTTCATCAAATTCGCTCATTTCACTTCAAATCAAGCAATTCTCGAAGCAGTGCATTGCTGTGATAATATTCATATTATAGACTTAGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCACATCCTCGCCACGCGAATGGAGGGCCGACCACGAGTTCGAATGACAGGCATGGGAGCTTCGATGGACCTCCTCGTTGAGACAGGCAAACAACTCACGAACTTCGCTAAAAGGCTTGGAATGTCGTTTCATTTCCAACCAATCGCGAAAAAGTTCGGGGAAATCGAGGATGTCTCCATGGTGCAAGTAAGACCCGGCGAGACACTGGCCATTCACTGGCTACAACACTCACTGTACGACGCAACAGGACCAGACTGGAAAACCCTGAGGCTTCTTGAAGAATTAGAGCCAAGAATCATAACCCTGGTGGAACAAGATATTTCAAGCGGCGGGTCGTTCTTGGATCGTTTTGTTGGGTCTTTACACTATTACTCTACTGTGTTCGATTCTCTTGGAGCTTATATGGCCAGTGAGGATCCTAACAGGCACAGGGTCGAACACGACCTTCTGTCTAAAGAGATAAATAACATATTGGCCATAGGAGGACCAGCAAGAAGTGGAGAAGACAAGCATAGACAATGGAGAAGTGAGCTTGCGAGGCATTGTTTTGTGCAGGTTCCGATGAGCCCTAATTCTATGGCTCAAGCTCAACTGATATTGAACATGTTCTCAGCTTCTCATGGCCATGGCTATACGCTTGCTCATGTTGATGGCACACTCAAACTTGGATGGAAGAACACTAGTTTGTATACTGCTTCTGCATGGACATGTTATTCCAATAATGACCTATAG 1548 0.4503 MKAGFEVIHGDFNMIRPHHMHESWDYPNNVGLSSSAATSSSIQFSKPPPIDTTTHNTVNLATNEFSDWVEHITKHLVDDLPAETTSDHNFLPYNNHHQTRSYSQDNLVGTVVSPVTYPRKGPFINNDLQIQIQTNPVDHHDQNNDGGLHLLTLLMECAVAISVDNLSEAHRVLLELTQVVSPYKPSCAERIVAYFAKAMSSRVMNSMLGVFSPLIDHRSIHSSFQVFNNVSPFIKFAHFTSNQAILEAVHCCDNIHIIDLDIMQGLQWPAFFHILATRMEGRPRVRMTGMGASMDLLVETGKQLTNFAKRLGMSFHFQPIAKKFGEIEDVSMVQVRPGETLAIHWLQHSLYDATGPDWKTLRLLEELEPRIITLVEQDISSGGSFLDRFVGSLHYYSTVFDSLGAYMASEDPNRHRVEHDLLSKEINNILAIGGPARSGEDKHRQWRSELARHCFVQVPMSPNSMAQAQLILNMFSASHGHGYTLAHVDGTLKLGWKNTSLYTASAWTCYSNNDL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1045g00001 515 ProSiteProfiles GRAS family profile. 141 508 IPR005202 -
Pral1045g00001 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 101 504 IPR005202 -
Pral1045g00001 515 Pfam GRAS domain family 151 508 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1045g00001 Pral-Chr1045 10776 12737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1045g00001 140 511 GRAS Transcription Factor Family AT3G54220 53.034 1.66e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1045g00001 GRAS 1.8e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1045g00001 - - pcin:129286457 855.129