Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1042g00001 AGGAATTTTTCAGCCACAGCTGGAGGAAGCTTTATCCCTCATGTAGTGATTGTGAATCCTGGAGAGGATGTTGCGAATAACATATTATCATTTTCTAATAAATCCCCTCGAGCTCTTTGCATACTCTCAGCTATTGGTGCTGTATCTATTGTCGACATTCAGCAACCGGATTCTTCTGGTCGTTGTTTGAGATATGAGGGTCTCTTTGAGATAATAACTTTATCTGGATCATATACCTATGGTGGCATCGGTGGTGATATGCACCGGAAAAGTCTCACCATGAGGATATCACTAGCTCAACCTGATGGGAAGATTTTCGGAGGTGGTGTTGGGGGCTCACTGATAGCAGCAGGCCCTATTCAATTAATTCTGGGCAGTTTTAAGCAAAACATCAGTAGTGAAATTAAAAGACGGCTGTCCCCTGGATCTTCTGGTGCTGCCGACATGCCTGGTGATTCAGATTCAGTGAGGCTTTCCTTACAGGTTCCTAAATTGATAGAATCTGAACAGAGCTTTCCTTCACCAACATCTGGACTTATGCCGACATCTAATGGATTGCCTGATCATGTCATGCCTAGAACATCTAATGGATTATCTGACAATGTCACTGCTGCCACAGCTAATGGTAATGGGTTGCCAGATTTCTTTACTCCGAATCAGAGCATGCAATCTACCTCGTTGAATGGTGCTGGCCTAGACTGTCAGGTCTTGCAGCCCTTTCCAGATCCAATGACGTTTGGAGATATTAATAATCGTGTCTCTCAGATGTGA 771 0.4384 RNFSATAGGSFIPHVVIVNPGEDVANNILSFSNKSPRALCILSAIGAVSIVDIQQPDSSGRCLRYEGLFEIITLSGSYTYGGIGGDMHRKSLTMRISLAQPDGKIFGGGVGGSLIAAGPIQLILGSFKQNISSEIKRRLSPGSSGAADMPGDSDSVRLSLQVPKLIESEQSFPSPTSGLMPTSNGLPDHVMPRTSNGLSDNVTAATANGNGLPDFFTPNQSMQSTSLNGAGLDCQVLQPFPDPMTFGDINNRVSQM 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1042g00001 256 ProSiteProfiles PPC domain profile profile. 8 152 IPR005175 -
Pral1042g00001 256 CDD DUF296 13 127 IPR005175 -
Pral1042g00001 256 Pfam Plants and Prokaryotes Conserved (PCC) domain 13 128 IPR005175 -
Pral1042g00001 256 SUPERFAMILY AF0104/ALDC/Ptd012-like 10 130 - -
Pral1042g00001 256 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 6 169 IPR039605 GO:0003680
Pral1042g00001 256 Gene3D - 13 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1042g00001 Pral-Chr1042 168 2239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1042g00001 6 127 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 51.639 5.07e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1042g00001 - - pcin:129313760 409.068