Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1041g00005 ATGGATGATGCTGGGCATCGTGAAAATGGGAGGCACAAAGCTGATCAATATAAATCAGCTCAGGGACAGTGGTTGATGCAACATCAACCTTCGATGAAGCAAATTATGGCAATTATGGCTGAAAGAGATGCAGCCATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCATGGCAGAGCGTGATATGGCATTCTTGCAACGAGATACTGCCATCGCAGAACGGAACAATGCCATTATGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGAGAGAACTCCATAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTACACCATTTACCTCATATGGGTGATACTTCTTACAGCACACGGGAAATACACACTGGTGATGACCTTCCAACAGCGTCCATGCCTAATGAAACAGGGAAATCACGGAGGGCCAAGCGACCAAAGGATGGTAAGTCAGTTTCACCTAGTAAGAAGGCACCAAGAGCTGCAAAAAAGGTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGCAAGGGCCATGAGTGGAAGAGTGGTCAGGACATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGGTCATCGAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTGTATGACGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACCGGTGTTCTGAGACAGTGCTACAAATGGGGTAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTGTCAATGTATCCACTTCCAGCTGTACCCAACAAGAGGCATGCTAGGGTTGGTGGGCGAAAGATGAGTGGAGGCGCTTTCAATAAGCTGCTTAGCCGGCTTGCAGCAGAGGGCCATGATCTGTCTAACCCAGTTGACCTGAAGGACCATTGGGCCAAACATGGCACAAACCGCTATATCACAATCAAGTAG 1014 0.4753 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAAMAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSIANGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYSTREIHTGDDLPTASMPNETGKSRRAKRPKDGKSVSPSKKAPRAAKKVKREGEDLNKMMFGKGHEWKSGQDMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1041g00005 337 MobiDBLite consensus disorder prediction 1 21 - -
Pral1041g00005 337 PANTHER - 1 337 IPR010409 -
Pral1041g00005 337 MobiDBLite consensus disorder prediction 1 15 - -
Pral1041g00005 337 MobiDBLite consensus disorder prediction 129 157 - -
Pral1041g00005 337 SMART GAGA_bind_2 1 337 IPR010409 -
Pral1041g00005 337 MobiDBLite consensus disorder prediction 158 174 - -
Pral1041g00005 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Pral1041g00005 337 Coils Coil 51 78 - -
Pral1041g00005 337 MobiDBLite consensus disorder prediction 121 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1041g00005 Pral-Chr1041 43085 47788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1041g00005 65 337 BBR or BPC Transcription factor family AT5G42520 64.041 6.98e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral1041g00005 GAGA_bind 1.9e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1041g00005 - - gmx:100783502 592.808