Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1041g00004 ATGGCAGAGCGTGATATGGCATTCTTGCAACGAGATACTGCCATCGCAGAACGGAACAATGCCATTATGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGAGAGAACTCCATAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTACACCATTTACCTCATATGGGTGATACTTCTTACAGCACACGGGAAATACACACTGGTGATGACCTTCCAACAGCGTCCATGCCTAATGAAACAGGGAAATCACGGAGGGCCAAGCGACCAAAGGATGGTAAGTCAGTTTCACCTAGTAAGAAGGCACCAAGAGCTGCAAAAAAGGTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGCAAGGGCCATGAGTGGAAGAGTGGTCAGGACATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGGTCATCGAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTGTATGACGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACCGGTGTTCTGAGACAGTGCTACAAATGGGGTAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTGTCAATGTATCCACTTCCAGCTGTACCCAACAAGAGGCATGCTAGGGTTGGTGGGCGAAAGATGAGTGGAGGCGCTTTCAATAAGCTGCTTAGCCGGCTTGCAGCAGAGGGCCATGATCTGTCTAACCCAGTTGACCTGAAGGACCATTGGGCCAAACATGGCACAAACCGCTATATCACAATCAAGTAG 837 0.4839 MAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSIANGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYSTREIHTGDDLPTASMPNETGKSRRAKRPKDGKSVSPSKKAPRAAKKVKREGEDLNKMMFGKGHEWKSGQDMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1041g00004 278 MobiDBLite consensus disorder prediction 99 115 - -
Pral1041g00004 278 Pfam GAGA binding protein-like family 2 278 IPR010409 -
Pral1041g00004 278 SMART GAGA_bind_2 1 278 IPR010409 -
Pral1041g00004 278 PANTHER - 1 278 IPR010409 -
Pral1041g00004 278 MobiDBLite consensus disorder prediction 70 98 - -
Pral1041g00004 278 MobiDBLite consensus disorder prediction 70 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1041g00004 Pral-Chr1041 43085 60452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1041g00004 6 278 BBR or BPC Transcription factor family AT5G42520 65.052 6.56e-121 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral1041g00004 GAGA_bind 1.9e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1041g00004 - - gmx:100783502 481.485