Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1035g00009 ATGGCACGATGGTCAGGTTTCACAAACGGATCTTCCGAAGATTGTCTTGAAACTGTTGGAGGACATCAGGGTAATGACTGTTGCCTGAACGTTGCTGAGGTTGTTACAGATCACCTTGATGTTGAAGTTAAACTAGAGTGCTTGTTTCATCAACTTCTATCAATTTGTATAAAGGAGAAGAATTCTGGAGGCACTATTCGTCCTGTACCTGTAATGCTTGGTGATGGTCAATCGTTGGATTTATACAAACTGTTCTTGTCTGTGAAGGAAAGAGGTGGGTATGCTTCGGTGTCGGAGAAAGGATTGTGGGGTTTTGTGACTAAGGAATTGGGTTTGAATCCTAAACTTTTGGCTTCGGTGAAATTAGTATATAACAAGTATTTGAATGAGTTTGAAAGATGGCTCAGCAAAACTCGTGGAGGAAATAATTTCAAAAGTGGAAATTGTGGGTGTAATATGGATTTTAAGTTTGAGCCGCCAGAGCTAGTAAATGAGTTTAGAGATTTATTATGTGGCAACGCCAAGTTGAAGGATGATGTATCCTTTCATCTGCAATCAAGTAAAATGAGAAGCAACATTGACTTGATTAATCACCAGAGTGAAACGAATTTGTTGGACAACAAAAATCAACCTCCTATATGCGAGAATCTCCACAGTACGCCTGGTGATGCCGACTTGAAATTTTGTAGAAGTGTTGAGAACGATCCTGTTACCTTGAACTCAGAAGCTCCTGTTAAGGAATTTAATTCTCGCAAGCGCAAACGAGACGCATTATTTTCAATGCTGAGCTGGATCAGAAAAACTGCAAAGCATCCTCTTGATCCTTCAATTGAACTGCTACCAGAGGCATCTAAGTGGAAGGATTATAAAGGACAAGATTTTTGGGTTCAGATGCTTAGAGCAAGAGAGGCACTACAACTGAGGTCTTGTGACAAACTAAGCTGCAGGCAGTCTTCCTTGCAGGAGCCACAGGACAACTCAACTACCTATTTGTTGTGCTTTGGTCAAATAATTTCCTTCCCTCACTGA 1029 0.4072 MARWSGFTNGSSEDCLETVGGHQGNDCCLNVAEVVTDHLDVEVKLECLFHQLLSICIKEKNSGGTIRPVPVMLGDGQSLDLYKLFLSVKERGGYASVSEKGLWGFVTKELGLNPKLLASVKLVYNKYLNEFERWLSKTRGGNNFKSGNCGCNMDFKFEPPELVNEFRDLLCGNAKLKDDVSFHLQSSKMRSNIDLINHQSETNLLDNKNQPPICENLHSTPGDADLKFCRSVENDPVTLNSEAPVKEFNSRKRKRDALFSMLSWIRKTAKHPLDPSIELLPEASKWKDYKGQDFWVQMLRAREALQLRSCDKLSCRQSSLQEPQDNSTTYLLCFGQIISFPH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1035g00009 342 SUPERFAMILY ARID-like 40 139 IPR036431 GO:0003677
Pral1035g00009 342 CDD ARID 60 132 - -
Pral1035g00009 342 Pfam ARID/BRIGHT DNA binding domain 57 132 IPR001606 GO:0003677
Pral1035g00009 342 ProSiteProfiles ARID domain profile. 43 136 IPR001606 GO:0003677
Pral1035g00009 342 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 40 315 - -
Pral1035g00009 342 SMART bright_3 44 137 IPR001606 GO:0003677
Pral1035g00009 342 Gene3D - 37 145 IPR036431 GO:0003677
Pral1035g00009 342 SMART ARID_2 40 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1035g00009 Pral-Chr1035 24425 27382 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pral1035g00009 ARID 7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1035g00009 - - gmx:100819320 308.531