Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1035g00008 ATGATCTGGGACGAGAAGCTTTCTCGATCCCGGCCGTGGGTTGACAAACAAAGAAGTAGGAAACCAAAGCATATGGCACGATGGTCAGGTTTCACAAACGGATCTTCCGAAGATTGTCTTGAAACTGTTGGAGGACATCAGGGTAATGACTGTTGCCTGAACGTTGCTGAGGTTGTTACAGATCACCTTGATGTTGAAGTTAAACTAGAGTGCTTGTTTCATCAACTTCTATCAATTTGTATAAAGGAGAAGAATTCTGGAGGCACTATTCGTCCTGTACCTGTAATGCTTGGTGATGGTCAATCGTTGGATTTATACAAACTGTTCTTGTCTGTGAAGGAAAGAGGTGGGTATGCTTCGGTGTCGGAGAAAGGATTGTGGGGTTTTGTGACTAAGGAATTGGGTTTGAATCCTAAACTTTTGGCTTCGGTGAAATTAGTATATAACAAGTATTTGAATGAGTTTGAAAGATGGCTCAGCAAAACTCGTGGAGGAAATAATTTCAAAAGTGGAAATTGTGGGTGTAATATGGATTTTAAGTTTGAGCCGCCAGAGCTAGTAAATGAGTTTAGAGATTTATTATGTGGCAACGCCAAGTTGAAGGATGATGTATCCTTTCATCTGCAATCAAGTAAAATGAGAAGCAACATTGACTTGATTAATCACCAGAGTGAAACGAATTTGTTGGACAACAAAAATCAACCTCCTATATGCGAGAATCTCCACAGTACGCCTGGTGATGCCGACTTGAAATTTTGTAGAAGTGTTGAGAACGATCCTGTTACCTTGAACTCAGAAGCTCCTGTTAAGGAATTTAATTCTCGCAAGCGCAAACGAGACGCATTATTTTCAATGCTGAGCTGGATCAGAAAAACTGCAAAGCATCCTCTTGATCCTTCAATTGAACTGCTACCAGAGGCATCTAAGTGGAAGGATTATAAAGGACAAGATTTTTGGGTTCAGATGCTTAGAGCAAGAGAGGCACTACAACTGAGGTCTTGTGACAAACTAAGCTGCAGGCAGTCTTCCTTGCAGGAGCCACAGGACAACTCAACTACCTATTTGTTGTGCTTTGGTCAAATAATTTCCTTCCCTCACTGA 1101 0.4124 MIWDEKLSRSRPWVDKQRSRKPKHMARWSGFTNGSSEDCLETVGGHQGNDCCLNVAEVVTDHLDVEVKLECLFHQLLSICIKEKNSGGTIRPVPVMLGDGQSLDLYKLFLSVKERGGYASVSEKGLWGFVTKELGLNPKLLASVKLVYNKYLNEFERWLSKTRGGNNFKSGNCGCNMDFKFEPPELVNEFRDLLCGNAKLKDDVSFHLQSSKMRSNIDLINHQSETNLLDNKNQPPICENLHSTPGDADLKFCRSVENDPVTLNSEAPVKEFNSRKRKRDALFSMLSWIRKTAKHPLDPSIELLPEASKWKDYKGQDFWVQMLRAREALQLRSCDKLSCRQSSLQEPQDNSTTYLLCFGQIISFPH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1035g00008 366 MobiDBLite consensus disorder prediction 1 21 - -
Pral1035g00008 366 Pfam ARID/BRIGHT DNA binding domain 81 156 IPR001606 GO:0003677
Pral1035g00008 366 CDD ARID 84 156 - -
Pral1035g00008 366 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 64 339 - -
Pral1035g00008 366 MobiDBLite consensus disorder prediction 1 15 - -
Pral1035g00008 366 SUPERFAMILY ARID-like 64 163 IPR036431 GO:0003677
Pral1035g00008 366 ProSiteProfiles ARID domain profile. 67 160 IPR001606 GO:0003677
Pral1035g00008 366 SMART bright_3 68 161 IPR001606 GO:0003677
Pral1035g00008 366 Gene3D - 62 169 IPR036431 GO:0003677
Pral1035g00008 366 SMART ARID_2 64 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1035g00008 Pral-Chr1035 24424 27382 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pral1035g00008 ARID 7.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1035g00008 - - gmx:100819320 308.531