Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1035g00003 ATGGGCGGTTGCTGTTGCTGTTGTTCAAGAGAAACCGAACTGAGGGATCCACCAGCGTACTTCTATCAGCCAAGAGCATCAGAGGAGCGTGTTCCTCTATCATCTAATCATGGTTCTGCGTCTGCTTTCTCCCGAGGGCTCCTTGTTGATACTAACCTTGAAACTTCAAGTCCTGACACTTATAGACCACCTCCTGCCCCTGCTCCTTACAGCAACGTTACTTTGGTTGTCACTCAAACTCCACCCGGGGTTCATGAAATTAGTGATAATAAGACTAATACATCCATTCAATCTACAGATTCTAATTCAGCTGAAGAAATAGTTACTAGTGATGGTCATGGAAATATGACCAAGTTGGAAGAGCAGAAAGAACTAGAGGGTAAAGTTCAGAGTGATTTAGAACTGGACCCAGCTAAGGATTCAGAAATTGAACTTCAAAAGCTAGATGAACCTGTCATTTTAGCTGAAGAGGAGGATGTGTGTCCTATCTGTTTAGAAGAGTACGATGATGAGAATCCAAAACTCAACACAAAATGTGATCATCATTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAAACTGTCCCGTGTGTGATAAGAATCCTGGTGTTGAATTTGATTACATGTGA 639 0.421 MGGCCCCCSRETELRDPPAYFYQPRASEERVPLSSNHGSASAFSRGLLVDTNLETSSPDTYRPPPAPAPYSNVTLVVTQTPPGVHEISDNKTNTSIQSTDSNSAEEIVTSDGHGNMTKLEEQKELEGKVQSDLELDPAKDSEIELQKLDEPVILAEEEDVCPICLEEYDDENPKLNTKCDHHFHLACILEWMERSENCPVCDKNPGVEFDYM 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1035g00003 212 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
Pral1035g00003 212 MobiDBLite consensus disorder prediction 83 109 - -
Pral1035g00003 212 CDD RING-H2_AIRP1-like 157 203 - -
Pral1035g00003 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 206 IPR013083 -
Pral1035g00003 212 Pfam Ring finger domain 160 201 IPR001841 -
Pral1035g00003 212 SUPERFAMILY RING/U-box 154 204 - -
Pral1035g00003 212 SMART ring_2 161 201 IPR001841 -
Pral1035g00003 212 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 38 203 - -
Pral1035g00003 212 FunFam Putative E3 ubiquitin-protein ligase RHB1A 138 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1035g00003 Pral-Chr1035 16507 19652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1035g00003 1 203 C3H Transcription Factor Family AT5G41350 52.174 8.90e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1035g00003 - - gmx:100816369 278.87