Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1027g00008 ATGACAATCATTATTTCAATCGCTCTGCTTTCTTTCGTTTCTCATTTCATCATTCTCACTACTGCACAGCAAAACTTTCTACATCATTTGTGTTTCAATAGTGCTGGTAACTACACAAACACAAGTTCCTACGACACAAACCTTAAAACCCTTCTTTCTAATCTCACTTCCGACCCAAAAATTGATTATGGCTACTACACTTCCTCTGAAGGCCAAAACCCTAATAGGGTCAACGCCCTTGGACTGTGTAGAGCAGATGTTAAGCCAGATTCTTGTCGTAGTTGCCTCAACAATGCCACAATCCTTCTACGAAAGCTATGCCCAAATCAGAAAGAAGGATATGGATTCAATGATGGGTGCATTTTACGATACGCTAATCGTTCCATGTCTGGGATAAACCAAGACCCTAATTATTTATACTACATGTGTAACGGAAATAATGCAACAGACGACAAGTACAGTGAAGTTCTTGATGGTCTAATGCGAAGGCTGAGAAGTAAAGCCGCTGCCGGCGATACTCGTCGTAAGTTTGCCGCTGGTACGGCGGCAGCTTTGTTTCAAACTGTGTATGGTCTTGCTCAGTGCATTCCTGATTTGTCTGAGCAAGATTGCGGCGACTGCTTGGAGAAGGCGATTGCGAGCATTCCCAGGGTTTGTAACAACAAGATTGGTGGGAGGATTATCAAACTGAGTTGCAATGTTAGATATGAGAATTTTCGATTCTATGATGTTGCGGTTGTCGATTCATTATCTTCATCTCCTCCAGCTGCTTCACCATCCAACACGTCTTCCCCACAAGGAAATGGCAACAGTACATCAAGAACAGTCATAATCGTGGCTGTGTCTATTGGTGCTTTTATCGCGATTCTTGTATTGATTTGCATCTATTTTATGGTTCGGAGATCGAAGAAAACAATTGAAACTGATCAACCTGAAGCAAAGGATGATGATGATGAAATTAAACCAATTGAGTCACTGCAATTTAATTTCAACACCATAAGACTCGCCACAGATAACTTCTCTATTGCCAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATATAAGGGCAAGCTTCCAAATGGGCAAGACATTGCTGTTAAAAGGTTGTCCATGGATTCCGGCCAAGGAGATTTAGAATTTAAAAATGAAGTGCTTTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTATTGGGCTTCTCCTTGGAAAAGAAAGAAAGGCTATTGGTATATGAGTTTCTTCCCAATAGAAGCCTTGATTACTTATTGTTTGATATGAATGAGAGTGTTCATTTGAATTGGGTTATGCGCCACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTACCTTCATGAAGATTCAAGATTACGTATTATTCATCGAGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCCAAAATATCAGATTTTGGTATGGCAAGACTATTTGTTGTTGACCAAACTCAAAGCAATACCAGCAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCCATCAAATCAGATGTTTTCAGTTTTGGCATATTGGTTCTAGAGATTGTAAGTGGCAAAAAGAACAACAGTGTCTTTGATGAAGAGAACGCCCATGATCTATTAAGCTATGCATGGAAAAATTGGAGAGACGGGACGGCTTTCAATTTAGCAGATCCTATATTAAACAATGGTTCAAAAAATGAAATAATGAGATGCATCCATATTGGGTTATTATGTGTTCAAGAAAATGTGGCTAATAGGCCAACCATGGCTTCAGTTGTAGTTATGCTGAATAGCTACTCTTCCTCTCTTCCCTTTCCTTCAAAGCCTCCACTTTTAATAAACACCAGAGGTTCATCAGAGATACATTTAAGGGAGTACAGTTCAGAAGCAACAAGATCAAATGAAGGAGGAAATAACTCTATTCAACAATCAGTAAATGAAGCATCAATTACTGAACTATATCCACGTTAG 2013 0.3934 MTIIISIALLSFVSHFIILTTAQQNFLHHLCFNSAGNYTNTSSYDTNLKTLLSNLTSDPKIDYGYYTSSEGQNPNRVNALGLCRADVKPDSCRSCLNNATILLRKLCPNQKEGYGFNDGCILRYANRSMSGINQDPNYLYYMCNGNNATDDKYSEVLDGLMRRLRSKAAAGDTRRKFAAGTAAALFQTVYGLAQCIPDLSEQDCGDCLEKAIASIPRVCNNKIGGRIIKLSCNVRYENFRFYDVAVVDSLSSSPPAASPSNTSSPQGNGNSTSRTVIIVAVSIGAFIAILVLICIYFMVRRSKKTIETDQPEAKDDDDEIKPIESLQFNFNTIRLATDNFSIANKLGQGGFGSVYKGKLPNGQDIAVKRLSMDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLVYEFLPNRSLDYLLFDMNESVHLNWVMRHKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGILVLEIVSGKKNNSVFDEENAHDLLSYAWKNWRDGTAFNLADPILNNGSKNEIMRCIHIGLLCVQENVANRPTMASVVVMLNSYSSSLPFPSKPPLLINTRGSSEIHLREYSSEATRSNEGGNNSIQQSVNEASITELYPR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1027g00008 670 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Pral1027g00008 670 CDD STKc_IRAK 346 611 - -
Pral1027g00008 670 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral1027g00008 670 Pfam Salt stress response/antifungal 143 238 IPR002902 -
Pral1027g00008 670 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
Pral1027g00008 670 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral1027g00008 670 Gene3D Transferase(Phosphotransferase) domain 1 416 618 - -
Pral1027g00008 670 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Pral1027g00008 670 MobiDBLite consensus disorder prediction 644 664 - -
Pral1027g00008 670 Pfam Protein kinase domain 342 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1027g00008 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 669 - -
Pral1027g00008 670 FunFam Cysteine-rich receptor-like protein kinase 10 300 415 - -
Pral1027g00008 670 SUPERFAMILY Protein kinase-like (PK-like) 325 634 IPR011009 -
Pral1027g00008 670 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral1027g00008 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Pral1027g00008 670 Gene3D Phosphorylase Kinase; domain 1 301 415 - -
Pral1027g00008 670 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1027g00008 670 MobiDBLite consensus disorder prediction 641 670 - -
Pral1027g00008 670 SMART serkin_6 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1027g00008 670 FunFam cysteine-rich receptor-like protein kinase 10 416 617 - -
Pral1027g00008 670 Gene3D - 135 241 IPR038408 -
Pral1027g00008 670 Gene3D - 23 128 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1027g00008 Pral-Chr1027 77693 82768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1027g00008 36 670 Receptor kinase-like Gene Family AT4G21410 48.476 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1027g00008 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1027g00008 - - qsa:O6P43_031179 786.563