Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1027g00007 ATGACAATCATTATTTCAATCGCTCTGCTTTCTTTCGTTTCTCATTTCATCATTCTCACTACTGCACAGCAAAACTTTCTACATCATTTGTGTTTCAATAGTGCTGGTAACTACACAAACACAAGTTCCTACGACACAAACCTTAAAACCCTTCTTTCTAATCTCACTTCCGACCCAAAAATTGATTATGGCTACTACACTTCCTCTGAAGGCCAAAACCCTAATAGGGTCAACGCCCTTGGACTGTGTAGAGCAGATGTTAAGCCAGATTCTTGTCGTAGTTGCCTCAACAATGCCACAATCCTTCTACGAAAGCTATGCCCAAATCAGAAAGAAGGATATGGATTCAATGATGGGTGCATTTTACGATACGCTAATCGTTCCATGTCTGGGATAAACCAAGACCCTAATTATTTATACTACATGTGTAACGGAAATAATGCAACAGACGACAAGTACAGTGAAGTTCTTGATGGTCTAATGCGAAGGCTGAGAAGTAAAGCCGCTGCCGGCGATACTCGTCGTAAGTTTGCCGCTGGTACGGCGGCAGCTTTGTTTCAAACTGTGTATGGTCTTGCTCAGTGCATTCCTGATTTGTCTGAGCAAGATTGCGGCGACTGCTTGGAGAAGGCGATTGCGAGCATTCCCAGGGTTTGTAACAACAAGATTGGTGGGAGGATTATCAAACTGAGTTGCAATGTTAGATATGAGAATTTTCGATTCTATGATGTTGCGGTTGTCGATTCATTATCTTCATCTCCTCCAGCTGCTTCACCATCCAACACGTCTTCCCCACAAGCTGATCAACCTGAAGCAAAGGATGATGATGATGAAATTAAACCAATTGAGTCACTGCAATTTAATTTCAACACCATAAGACTCGCCACAGATAACTTCTCTATTGCCAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATATAAGGGCAAGCTTCCAAATGGGCAAGACATTGCTGTTAAAAGGTTGTCCATGGATTCCGGCCAAGGAGATTTAGAATTTAAAAATGAAGTGCTTTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTATTGGGCTTCTCCTTGGAAAAGAAAGAAAGGCTATTGGTATATGAGTTTCTTCCCAATAGAAGCCTTGATTACTTATTGTTTGATATGAATGAGAGTGTTCATTTGAATTGGGTTATGCGCCACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTACCTTCATGAAGATTCAAGATTACGTATTATTCATCGAGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCCAAAATATCAGATTTTGGTATGGCAAGACTATTTGTTGTTGACCAAACTCAAAGCAATACCAGCAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCCATCAAATCAGATGTTTTCAGTTTTGGCATATTGGTTCTAGAGATTGTAAGTGGCAAAAAGAACAACAGTGTCTTTGATGAAGAGAACGCCCATGATCTATTAAGCTATGCATGGAAAAATTGGAGAGACGGGACGGCTTTCAATTTAGCAGATCCTATATTAAACAATGGTTCAAAAAATGAAATAATGAGATGCATCCATATTGGGTTATTATGTGTTCAAGAAAATGTGGCTAATAGGCCAACCATGGCTTCAGTTGTAGTTATGCTGAATAGCTACTCTTCCTCTCTTCCCTTTCCTTCAAAGCCTCCACTTTTAATAAACACCAGAGGTTCATCAGAGATACATTTAAGGGAGTACAGTTCAGAAGCAACAAGATCAAATGAAGGAGGAAATAACTCTATTCAACAATCAGTAAATGAAGCATCAATTACTGAACTATATCCACGTTAG 1890 0.3952 MTIIISIALLSFVSHFIILTTAQQNFLHHLCFNSAGNYTNTSSYDTNLKTLLSNLTSDPKIDYGYYTSSEGQNPNRVNALGLCRADVKPDSCRSCLNNATILLRKLCPNQKEGYGFNDGCILRYANRSMSGINQDPNYLYYMCNGNNATDDKYSEVLDGLMRRLRSKAAAGDTRRKFAAGTAAALFQTVYGLAQCIPDLSEQDCGDCLEKAIASIPRVCNNKIGGRIIKLSCNVRYENFRFYDVAVVDSLSSSPPAASPSNTSSPQADQPEAKDDDDEIKPIESLQFNFNTIRLATDNFSIANKLGQGGFGSVYKGKLPNGQDIAVKRLSMDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLVYEFLPNRSLDYLLFDMNESVHLNWVMRHKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGILVLEIVSGKKNNSVFDEENAHDLLSYAWKNWRDGTAFNLADPILNNGSKNEIMRCIHIGLLCVQENVANRPTMASVVVMLNSYSSSLPFPSKPPLLINTRGSSEIHLREYSSEATRSNEGGNNSIQQSVNEASITELYPR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1027g00007 629 Pfam Protein kinase domain 301 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1027g00007 629 MobiDBLite consensus disorder prediction 600 629 - -
Pral1027g00007 629 SUPERFAMILY Protein kinase-like (PK-like) 284 593 IPR011009 -
Pral1027g00007 629 MobiDBLite consensus disorder prediction 253 268 - -
Pral1027g00007 629 SMART serkin_6 299 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1027g00007 629 FunFam Cysteine-rich receptor-like protein kinase 10 262 374 - -
Pral1027g00007 629 MobiDBLite consensus disorder prediction 253 276 - -
Pral1027g00007 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pral1027g00007 629 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral1027g00007 629 ProSiteProfiles Protein kinase domain profile. 299 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1027g00007 629 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Pral1027g00007 629 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Pral1027g00007 629 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral1027g00007 629 FunFam cysteine-rich receptor-like protein kinase 10 375 576 - -
Pral1027g00007 629 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 583 - -
Pral1027g00007 629 MobiDBLite consensus disorder prediction 603 623 - -
Pral1027g00007 629 Gene3D - 135 241 IPR038408 -
Pral1027g00007 629 Gene3D - 23 128 IPR038408 -
Pral1027g00007 629 Gene3D Phosphorylase Kinase; domain 1 262 374 - -
Pral1027g00007 629 Gene3D Transferase(Phosphotransferase) domain 1 375 577 - -
Pral1027g00007 629 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
Pral1027g00007 629 CDD STKc_IRAK 305 570 - -
Pral1027g00007 629 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral1027g00007 629 Pfam Salt stress response/antifungal 143 238 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1027g00007 Pral-Chr1027 77693 82768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1027g00007 27 629 Receptor kinase-like Gene Family AT4G38830 46.708 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1027g00007 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1027g00007 - - qsa:O6P43_031179 735.332