Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1027g00002 ATGCAAGTGAAGAAGAAGGATCAAGGGCCTATAAGGAAAGGGCCATGGAAAGCCGAGGAAGACGAAGTGCTTCTAAGCCATGTCAACAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGCCTTCTTCAACGCACCGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAGCTTCGTCCAAACCTCAAGAGTGGATGCAAATTTTCGCTGGAGGAGGAGAGGGTGGTGATTGAGTTGCAAGCACAATTTGGGAACAGATGGGCCAAGATTGCGTCTTATTTGCCAGGAAGAACAGATAATGATGTCAAGAATTTCTGGAGTAGTAGGCGAAAGAGGATCGCTAGGATTCTGCATTCTTCACCGCCATCATCTAAATCCTACAAGAACAAAAATGAAGTCCCCAGTTTCCACAATGTTTCCCCTCTGGAGGCTCGTAAGTTCAGTTCTTCATCTGTGGAAGAATCATCATCAAAAGCTCATCAGCCACGCTCATCATCCTTTACTACTGAGAATTCAGAGGTCATAAAGATGGTGCCATTGCAAGATCTCATGAACTCCACCAATCCCTCGAGTTCTGACACAGTCAATTCGATCAAAGAAGAGTTTGCGACATCGTTTGAGAGCTACATGAGCACTGACATAAGCTCAGGAATTGGTTTCCCGCAGATTTTTCCATTCTCAATGGAAAGTCAAGATCTTTTCTTGGCCAGATCTAATGAGTCTGCTGGTTTCATTGATGAATTGGGATTAGTAGGGGACCCTATGGATGATGATGCCTCAGAACTTGGAATAGGAACACAGATTCCATTTTAG 819 0.4518 MQVKKKDQGPIRKGPWKAEEDEVLLSHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKSGCKFSLEEERVVIELQAQFGNRWAKIASYLPGRTDNDVKNFWSSRRKRIARILHSSPPSSKSYKNKNEVPSFHNVSPLEARKFSSSSVEESSSKAHQPRSSSFTTENSEVIKMVPLQDLMNSTNPSSSDTVNSIKEEFATSFESYMSTDISSGIGFPQIFPFSMESQDLFLARSNESAGFIDELGLVGDPMDDDASELGIGTQIPF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1027g00002 272 ProSiteProfiles Myb-like domain profile. 69 112 IPR001005 -
Pral1027g00002 272 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pral1027g00002 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 116 IPR017930 -
Pral1027g00002 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 56 IPR017930 -
Pral1027g00002 272 CDD SANT 69 108 IPR001005 -
Pral1027g00002 272 CDD SANT 15 60 IPR001005 -
Pral1027g00002 272 Pfam Myb-like DNA-binding domain 16 75 - -
Pral1027g00002 272 SMART sant 12 62 IPR001005 -
Pral1027g00002 272 SMART sant 66 114 IPR001005 -
Pral1027g00002 272 PANTHER TRANSCRIPTION FACTOR DUO1 4 235 - -
Pral1027g00002 272 FunFam Transcription factor GAMYB 68 137 - -
Pral1027g00002 272 Gene3D - 13 65 - -
Pral1027g00002 272 MobiDBLite consensus disorder prediction 152 173 - -
Pral1027g00002 272 FunFam MYB transcription factor 13 65 - -
Pral1027g00002 272 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral1027g00002 272 Gene3D - 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1027g00002 Pral-Chr1027 12201 13861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1027g00002 1 121 MYB Transcription Factor Family AT3G60460 80.165 8.90e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral1027g00002 Myb_DNA-bind_6 4.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1027g00002 K09422 - gmx:100805384 299.286