Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1025g00002 ATGGATGCCAACAATGAGAATCAGGAACATGCTTCTGTTTGTTCTTTTAATCCTATGATGTTGTCTACTGATCATGTTTACCTTGCAGTGTTAAATGCTGCTATTGAGCTGAACTTGTTTGAGATTATTGGTAAGGGAAGCCCTAAGGGCATGTCTGCCTCCGAAATCGCTTCCAAGCTAGGGACTCCACATGCCGGCATGGCTCATCGGCTAGACCGAATGTTGTTTTTGCTTTCTAATTACTCTTTCTTGACTTGTTCTTCCAATAAACTTGATCAACATGGTAAGATTGAGAGGCTTTATGGTCTATCTCCTGGTGGTAAATACTTAATCACCAATGAAGATGAAACTTCTTACGTTAGACTCTTCAAATTATGTAATCATCCCACTTTCATAAAGATTTGGCAAAACTTCAAGCAAGTGATTCTTGATGAGGAAGAGGACCTTTTCAAGACAGTTAATGAGATGTCTATTTACGAATATATGGAAATGGATCCAACGTTCAAAACTACTTTTCATGGGGCAATGGCTGATTTATCGATCATACAGATGAAGGATGTACTTGAGACATATAAAGGATTTGAGGGAATATCAACACTTGTTGATGTGGTGGTGCCATGGCCAAAGCCTTAG 633 0.3918 MDANNENQEHASVCSFNPMMLSTDHVYLAVLNAAIELNLFEIIGKGSPKGMSASEIASKLGTPHAGMAHRLDRMLFLLSNYSFLTCSSNKLDQHGKIERLYGLSPGGKYLITNEDETSYVRLFKLCNHPTFIKIWQNFKQVILDEEEDLFKTVNEMSIYEYMEMDPTFKTTFHGAMADLSIIQMKDVLETYKGFEGISTLVDVVVPWPKP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1025g00002 210 FunFam Caffeic acid 3-O-methyltransferase 2 110 - -
Pral1025g00002 210 Gene3D - 1 110 IPR036388 -
Pral1025g00002 210 SUPERFAMILY "Winged helix" DNA-binding domain 20 115 IPR036390 -
Pral1025g00002 210 Gene3D Vaccinia Virus protein VP39 111 204 IPR029063 -
Pral1025g00002 210 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pral1025g00002 210 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 210 IPR016461 GO:0008168
Pral1025g00002 210 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 203 IPR029063 -
Pral1025g00002 210 PANTHER O-METHYLTRANSFERASE 21 203 IPR016461 GO:0008168
Pral1025g00002 210 Pfam O-methyltransferase domain 135 203 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1025g00002 Pral-Chr1025 4014 4770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1025g00002 19 203 Monolignol Biosynthesis Gene Families AT5G54160 45.161 1.20e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1025g00002 K13066 - gmx:100784030 172.555