Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1022g00001 ATGGCGGCAGCGAGGCGGCTCCGGGACCTGCAAGCCCAACCGGGGAACAGGATCTGCGTTGATTGCTCTCAGAAGAACCCCCAATGGGCGTCCGTTTCCTATGGAGTTTTCATGTGCTTAGAATGCTCCGGCAAGCACCGTGGCCTCGGGGTCCACATCTCCTTCGTCCGATCCGTTACGATGGATTCCTGGTCCGAAATCCAGATCAAGAAGATGGAAGCAGGTGGTAATGAGCAACTCAACGCCTTCCTCGCCCAGTATGGTATCGCCAAGGAGACCGATATTGTCACCAAGTACAATACTAATGCGGCTAGCGTTTATAGGGATCGAATTCAGGCCCTTGCCGAGGGACGACCGTGGCGGGATCCACCGGTTGTCAAGGAGAACCTTGGCCCTGGGAAGAGCAAGCCTCCTTTGCCAAAAAGTGGAAACGATGGAGGCTGGGATAGTTGGGATAACGATGACGGTGTCAGATCTCCCCATGACTTCAAGCGCAACATGTCTACGGGGGATGTGAGGGGGTTCAATGGAGGTTCGACCGGCAGCAGGCCCGCGAGATCGAGGTCGACTGAGGATATCTACACGCGGTCGCAATTGGAGGCTTCCGCTGCCAACAAAGATAACTTCTTCGCTCGCAAGATCGCAGAGAACGAATCACGACCCGAAGGGCTTCCCCCCTCGCAAGGTGGCAAGTACGTTGGATTCGGATCTAGTGTCGCACCTTCCCGGGTGACTAACCAACAAAACGATGTCTTCTCAGTTATGTCTCAGGGATTTGGTAAATTGTCTTTGGCTGCTGCCTCAGCGGCTCAGTCTGCTGCTACTGTTGTTCAGGCTGGCACTAAAGAGATCGCTACCAAGGTAAAGGATGGTGGCTATGATTACAGAGTCAACGAAACTGTCAATGTTGTCTCTCAGAAGACATCAGAGATAGGACAAAGGACGTGGGGGATAATGAAGGGGGTCATGGCTTTGGCTTCGCAGAAAGTTGAGGAGTACGCCAGAGATAACCCAAACTGGACATCTGATAACTGGCAGCGAAATGAAAATGGTAGAAATGGCTATTATCAAGAATATAATCAAGAGAATAAAGGTTGGAATTCTTCTAGTGGAGGAGGGCAACCTTCATCAGCTGGGCAGAATAATACTTATCACTCAAGCTCATGGGATGACTGGGGCAATGATGATACTAGGAAAGAACCAGCTAAAGCATCAGCTACTCATAACAATGATGGTTGGGCTGGCTGGGATGATCCTAAAGATGATGAATATGATAATTCGTACCAGAGTGTATCAAATAAGAATGCAGTTGGTCAGAATGGGAAGCCAGGTGACAGGTGGACAGGGGGAGGCTTTATGTAA 1362 0.5066 MAAARRLRDLQAQPGNRICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNEQLNAFLAQYGIAKETDIVTKYNTNAASVYRDRIQALAEGRPWRDPPVVKENLGPGKSKPPLPKSGNDGGWDSWDNDDGVRSPHDFKRNMSTGDVRGFNGGSTGSRPARSRSTEDIYTRSQLEASAANKDNFFARKIAENESRPEGLPPSQGGKYVGFGSSVAPSRVTNQQNDVFSVMSQGFGKLSLAAASAAQSAATVVQAGTKEIATKVKDGGYDYRVNETVNVVSQKTSEIGQRTWGIMKGVMALASQKVEEYARDNPNWTSDNWQRNENGRNGYYQEYNQENKGWNSSSGGGQPSSAGQNNTYHSSSWDDWGNDDTRKXEPAKASATHNNDGWAGWDDPKDDEYDNSYQSVSNKNAVGQNGKPGDRWTGGGFM 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1022g00001 454 MobiDBLite consensus disorder prediction 172 197 - -
Pral1022g00001 454 MobiDBLite consensus disorder prediction 151 168 - -
Pral1022g00001 454 MobiDBLite consensus disorder prediction 391 405 - -
Pral1022g00001 454 Gene3D Arf GTPase activating protein 1 124 IPR038508 -
Pral1022g00001 454 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Pral1022g00001 454 SUPERFAMILY ArfGap/RecO-like zinc finger 5 112 IPR037278 -
Pral1022g00001 454 MobiDBLite consensus disorder prediction 118 197 - -
Pral1022g00001 454 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Pral1022g00001 454 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Pral1022g00001 454 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Pral1022g00001 454 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Pral1022g00001 454 MobiDBLite consensus disorder prediction 337 390 - -
Pral1022g00001 454 MobiDBLite consensus disorder prediction 337 454 - -
Pral1022g00001 454 CDD ArfGap_ArfGap1 3 117 - -
Pral1022g00001 454 Pfam Putative GTPase activating protein for Arf 5 101 IPR001164 GO:0005096
Pral1022g00001 454 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 453 IPR044519 GO:0005096|GO:0016192
Pral1022g00001 454 SMART arf_gap_3 4 120 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1022g00001 Pral-Chr1022 6715 11626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1022g00001 5 87 C2H2 Transcription Factor Family AT4G05330 51.190 2.00e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1022g00001 K12492 - qsa:O6P43_010403 709.909