Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1020g00005 ATGTTTGCCTCAACGATCCTAACACCGTCTAAACTGAAACCTTTGCATTTCGTGTTACTCCCCCCAAACAACAACATTGAAATCTTCCCATCTGGAAGCAGAATATGCCGGCGAAGCAGAGTGTCAGTTTATTATAAATTAGCCCATCAAAGTTGCAGTCTTTACCCGAAATCGAACACTAGACCTATAGTGGCCACGAGGGTCAGTAATGGCGATGATGGCGCGTTTGATGCTGCTTCACAACAGTCTTCCCCTCCTCCTTCTGACACTGAAGAAGTGAAGAGTACCTCTTCTGGTCTCGGTGATGGTTATGTGGCCTTATTTGTTCGAATGTTAGGCTTAGATCATGATCCTCTTGATAGAGAACAGGCTATAATTGCTTTGTGGAAATATTCACTTGGCGGAAAGCAGTGTGTTGATACTTTAATGCGGTTTCCTGGCTGCGTTAATCTTACTGTGAACCTCCTCAGATCAAATTCTAGTTCAGCATGTGAAGCAGCTGCAGGCCTCCTGCGATCTCTATCTTCAGTCAATCTATACAGGAATTTGGTAGCAGAGAGTGGAGCAATAGAAGAGATAAATAGACTGCTGAGGCAGTCTTCCTTGGCTCCTGAGGTAAAGGAGCAGAGTATGAGTACATTGTGGAATTTATCTGTGGATGAGAAGCTCCGCATTAAACTTACAAAGAGTGATATCCTGCCATTGATTATTAAGTACCTTGAAGAGGAGGATGTAAAAGTGAAGGAAGCTGCAGGAGGCATATTGGCAAATTTAGCTTTGAGTCATGTTAACCACAGCATTTTGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCCTGACTTCTGATTCTGAAGGATCCAAAGTCATTAAAAAGGAAGCAAAAAATGCATTGCTGGAATTTGTCAAGGATGAATATTATAAAATTCTTGTTGTTGAGGAAGGTCTGGTTCCTGTGCCACTGATTGGTGCTGAGGCATACAAGTCGTTCTCCCCTGGTCTGCATTCATGGCCCAAATTACCAGATGGTACAGAGATTGAACGGGCTTCTCTAAAACCTTCCAGGTATGGCGCATCAGAATTACTTCTTGGGCTTAATATTGATGATAAGAGAGCTAACATAGAGGAAGCAAAAATGAATGCGATTGTGGGACGGACACAACAACAATTTCTTGCCCGTATTGGGGCTATAGAATGGGAAGGAAAAAGCACATCTGATTCCGAAAGCTCTGATAGACAACAACTTACACTTTTACCTTGGATGGATGGTGTTGCTCGCTTGGTACTTATGTTAGAACTGGAAGATAAGTCTCCCATAAAAAGGGCTGCAGAGTCAATAGCTGATGTATCCATCAATGAACATATGCGCATTGCATTCAAGGAGGCTGGAGCTGTTAGGCACTTAGTTCGGCTTTTGAATTGTGATGATGATGCTGTCAGATTGGCTGTAACTCAAGCTTTGGAGAGGTTGTCCGCCAGCAATGGAGTCTGCCAGAAAATTGAATCTGAGGGAGCGTTAGGTCCTTTAATTAATATTCTAAAATGCTCAGAGGTTTCTGAAAGTATTGCAGAAAAGTCTTTGAATACAATTGCTCGCATACTAGACCCCAGTAAAGAGATGAAACTGAAGTTTTATGATGGACCAGTGAATGGATCTGAGAAGGATTTCAGGAATGATGTACTGGATTCTGCTTTTGTAGCTCGCCTTGTTGAGATTCTGAAGTCCTCTTCTCCCACTTTACAAGGAAAAGCTGCATCAGTTCTCGAGTTTGTTGCATTGACGGACCCAGCTTTGGTCTCCATTACATCTGTAGATATTGAAACTGCTCTCAATGCTGTCTTTGAGCAAAAAATTTTGAGAATTTCAGGTGGAGAACCTGATGTAGAAGATCAGGTTTCAGAAGCATACCCGATTGAAGTCGAAGAAGCTGGCCTTGCCATATCTGCAGCATCCCGCTTAATGACGAGACTACTCGACTGTCAGCATTTTCGCGACAACGTAAATTCTTTCCATTTCATTGGCTTGCTTCGAAAAATCCTCAAGTCCTGTATTCCTCTCCACAGCAAAGACTGGGTGGCTGCTTGCCTAGTTAAACTCAGCTCTCTCTCCAGTGACAACCCAAGTATTGATCCAATCAATGTGGAAGTTACACTTTATGAGACAATCCCAAGACTGGTAGAACAGATAAAAACTTCGTTCTCTCTGGAAGCACAGGAAGCTGCTGTTGTAGAACTGAACAGAATAATATCTGAAGAAGTAGTGCATTCTGCTAGAGCTATTGTGTCTGAGGGGGCCATAGACCCATTGGTGATGCTGATAGGAGGAGGAACTGAAAGGGCCGTTGAAGCAGGATTGGCTATATTGTATAATCTGAGCATGGACCCTGAGAACCATTCATTGATTTTGGCTGCTGGAGCAGTCCCTGTATTGAGAAGGATTGTGCTCTCACAGAGGCCACAATGGGAAAAGGCTCTTCATTTACTAAGAAATTTGCCCACTTGA 2505 0.4299 MFASTILTPSKLKPLHFVLLPPNNNIEIFPSGSRICRRSRVSVYYKLAHQSCSLYPKSNTRPIVATRVSNGDDGAFDAASQQSSPPPSDTEEVKSTSSGLGDGYVALFVRMLGLDHDPLDREQAIIALWKYSLGGKQCVDTLMRFPGCVNLTVNLLRSNSSSACEAAAGLLRSLSSVNLYRNLVAESGAIEEINRLLRQSSLAPEVKEQSMSTLWNLSVDEKLRIKLTKSDILPLIIKYLEEEDVKVKEAAGGILANLALSHVNHSILVEAGVIPKLAKFLTSDSEGSKVIKKEAKNALLEFVKDEYYKILVVEEGLVPVPLIGAEAYKSFSPGLHSWPKLPDGTEIERASLKPSRYGASELLLGLNIDDKRANIEEAKMNAIVGRTQQQFLARIGAIEWEGKSTSDSESSDRQQLTLLPWMDGVARLVLMLELEDKSPIKRAAESIADVSINEHMRIAFKEAGAVRHLVRLLNCDDDAVRLAVTQALERLSASNGVCQKIESEGALGPLINILKCSEVSESIAEKSLNTIARILDPSKEMKLKFYDGPVNGSEKDFRNDVLDSAFVARLVEILKSSSPTLQGKAASVLEFVALTDPALVSITSVDIETALNAVFEQKILRISGGEPDVEDQVSEAYPIEVEEAGLAISAASRLMTRLLDCQHFRDNVNSFHFIGLLRKILKSCIPLHSKDWVAACLVKLSSLSSDNPSIDPINVEVTLYETIPRLVEQIKTSFSLEAQEAAVVELNRIISEEVVHSARAIVSEGAIDPLVMLIGGGTERAVEAGLAILYNLSMDPENHSLILAAGAVPVLRRIVLSQRPQWEKALHLLRNLPT 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1020g00005 834 MobiDBLite consensus disorder prediction 74 98 - -
Pral1020g00005 834 Gene3D - 643 833 IPR011989 -
Pral1020g00005 834 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 765 807 IPR000225 GO:0005515
Pral1020g00005 834 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 59 558 - -
Pral1020g00005 834 SUPERFAMILY ARM repeat 658 830 IPR016024 -
Pral1020g00005 834 MobiDBLite consensus disorder prediction 75 97 - -
Pral1020g00005 834 SUPERFAMILY ARM repeat 105 536 IPR016024 -
Pral1020g00005 834 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 231 273 IPR000225 GO:0005515
Pral1020g00005 834 Gene3D - 410 631 IPR011989 -
Pral1020g00005 834 SMART arm_5 553 594 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 453 493 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 494 536 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 220 260 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 261 304 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 177 219 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 795 834 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 135 176 IPR000225 GO:0005515
Pral1020g00005 834 SMART arm_5 754 794 IPR000225 GO:0005515
Pral1020g00005 834 Pfam Armadillo/beta-catenin-like repeat 453 493 IPR000225 GO:0005515
Pral1020g00005 834 Gene3D - 89 325 IPR011989 -
Pral1020g00005 834 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 221 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1020g00005 Pral-Chr1020 32621 38218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1020g00005 147 324 U-box Gene Family AT1G23030 29.213 2.38e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1020g00005 - - pcin:129311654 1410.59