Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1020g00001 ATGACCAAATCTCTCAGTTTTCTGCATAATCTGATTAAACCCTTCAGACTCGGTTCTAGTAAAGAAGGAGGCAACGAAGAAGAGTTAGAGAGAATTGCTGCCCAGGAACAAAAGATCTTTACCTATGAAACCTTACTTGCTGCTACAAAAAATTTTCATTCTCATCACAAGCTTGGTGAGGGAGGTTTTGGACCCGTCTACAAGGGGAAGTTGGACGATGGAAGAGAGATTGCGGTAAAGAAGTTATCGCAAAGCTCAAATCAAGGGAACAAAGAGTTCATGAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGCCCATGGCACAGAGAAGCTACTTGTGTATGAGTATGTTCCTCATGAGAGCCTTGACAAACTTCTATTCAAATCTCACAGAAAAGAGCAGCTGGATTGGAAAAGGAGGTTGGACATAATCACAGGCATAGCAAGAGGCTTACTCTATCTTCATGAAGACTCGCACAGCTGCATCATCCACCGAGACATCAAGGCCAGTAATATCTTGCTCGATGACAAATGGATGCCCAAGATTGCAGACTTTGGCATGGCTCGTCTCTTCCCTGAGGATCAAACTCACGTCAATACACGGGTGGCTGGCACCAATGGATATATGGCTCCAGAGTATGTGATGCATGGGCATTTATCAGTGAAGGCAGATGTGTTTAGCTATGGGGTTTTGGTTCTGGAGCTGATAAGTGGCCAAAGAAACTCAATGTTTAGCCCTGAGATGGATGCACATAATCTCCTTGATTGGGCATACAAGCTTTACAAGAAAGGGAGGAGCTTAGAAATGGTTGACCCTGCAATAGCAGGTTCAGCAGAAGATCAAGTAGCAATGTGCATACAACTGGGTCTGCTATGCGTTCAAGGGGATCCACATATCCGGCCAAGCATGCGGCGCGTGGTGGTGATGCTGTCAAAGAAGCCGGGCCACATGGATGAGCCGACTAGACCAGGAGCGCCTGGTTCCAGATACAGAAGACCTCGCAGGCGCTCCACATTTTCTACCGCAGCTGGTACTTCAGGTGCTGACTCTGATTCTCGGACTTCTGACTCAAGCAGTAACTATACCACCATCGCAACAACACCGGGAACAAGCTCCAGCGCTCGGGAAATTGACCCTCGTGGAAAACGTCCCATGCATGAGGCTTAG 1200 0.4733 MTKSLSFLHNLIKPFRLGSSKEGGNEEELERIAAQEQKIFTYETLLAATKNFHSHHKLGEGGFGPVYKGKLDDGREIAVKKLSQSSNQGNKEFMNEAKLLARVQHRNVVNLLGYCAHGTEKLLVYEYVPHESLDKLLFKSHRKEQLDWKRRLDIITGIARGLLYLHEDSHSCIIHRDIKASNILLDDKWMPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSYGVLVLELISGQRNSMFSPEMDAHNLLDWAYKLYKKGRSLEMVDPAIAGSAEDQVAMCIQLGLLCVQGDPHIRPSMRRVVVMLSKKPGHMDEPTRPGAPGSRYRRPRRRSTFSTAAGTSGADSDSRTSDSSSNYTTIATTPGTSSSAREIDPRGKRPMHEA 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1020g00001 399 Pfam Protein tyrosine and serine/threonine kinase 54 320 IPR001245 GO:0004672|GO:0006468
Pral1020g00001 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pral1020g00001 399 CDD STKc_IRAK 58 323 - -
Pral1020g00001 399 MobiDBLite consensus disorder prediction 322 399 - -
Pral1020g00001 399 FunFam Cysteine-rich receptor-like protein kinase 10 129 333 - -
Pral1020g00001 399 SMART serkin_6 52 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1020g00001 399 ProSiteProfiles Protein kinase domain profile. 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1020g00001 399 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Pral1020g00001 399 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 376 - -
Pral1020g00001 399 MobiDBLite consensus disorder prediction 349 385 - -
Pral1020g00001 399 Gene3D Phosphorylase Kinase; domain 1 18 127 - -
Pral1020g00001 399 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Pral1020g00001 399 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1020g00001 Pral-Chr1020 2453 7082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1020g00001 42 337 Receptor kinase-like Gene Family AT4G23230 52.013 1.77e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1020g00001 Pkinase 4.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1020g00001 - - zju:107429294 592.808