Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1019g00004 ATGGCCATTGCATCTTTCACTTTATCTTCTCTGCTTCAACCCTCCAGTTCTTCTATTTCTTCTTCTTCTTCTTCTTACTTCCTTGGTGGGGTCCATCTCCGCTCCCATGAAAGCTTCATCTCTGTCCCTTCGCTTTATTCGACTTCAAATACGGAGGTCCCTTCTAGGCGCCTGCGAATAGTGGCTGTTGCTTCTGGCGACTATTATGCTGCTCTTGGAGTTCCCAAATCCGCCACAAGCAAGGAAATTAAAGCGGCTTATCGAAGGTTAGCTCGCCAGTACCATCCTGATGTGAACAAGGAGCCTGGGGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCATATGAGGTACTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGAGAGGCCGGAGTTAACGGCTCCATGGGAGGAGCATCTAGTGCTTATGCGACTAATCCATTCGATTTATTCGAGACATTTTTTGGGCCAAATATGGGTGGCTTCTCTGGAATGGATCCAACTGGATTTGGAACACGTCGTCGCAGTACTGTTACTAAGGGAGAAGATATTCGTTATGACATGTCCCTGGAACTTTCTGAGGTAATTTCTGGAGCAGAGAAAGAATTTGACCTTTCTCATTTGGAAACCTGTGAAGTCTGTATTGGAACCGGAGCAAAGATGGGCTCCAAGATGATAGTGTGCACAACTTGTGGTGGTAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGAATGTTCTCTCAGGTTTCAGTATGCCCAAACTGTGGAGGGGATGGCGAAGTCATATCTGAATATTGTGGCAAATGCAGCGGGAAGGGACGTCTACGAGTTAAGAAGAAAATTAAAGTTCAAGTTCCACCTGGGGTTAGCTCGGGCAGTATATTGAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGACCTTTACGTATATCTTGATGTGAAAGAAATACCAGGAATTGAAAGAGACGGTATTAATCTCTGTTCAACAATCACAATCGGTTACCTAGATGCCATACTTGGAGCCACTGCCAAGATAAAGACAGTTGAAGGCATTTCCGAACTACAAATACCTCCTGGTACCCAACCTGGAGATGTTCTTGCCCTTGCAAGAAAAGGCGTTCCGAAACTAAACAAACCATCAATACGTGGTGATCATCTGTTTGCAGTTAAAGTTACTATACCAAAACGTATCAGTACAAAGGAACGTGATCTGCTTGAAGAACTTGCTTTGCTTGGCAACAACACTGCAAGCAACCGATCAAAATCCCGTCCTAGAACTCAATCTTCTGGAAGTACAGAAGGTCCATCATCTCAAAATGCCGAAAGTCCAGCACCAACAGTATCAGAAAAAGCTGGAGAATCAGAAGATCAAAATGACATATGGAAAAAGTTAAAAGATCTTGCTAGACCTCTCGCAAATGGAGCATTAAAGTGGCTAAAAGATAATCTCTAG 1485 0.4431 MAIASFTLSSLLQPSSSSISSSSSSYFLGGVHLRSHESFISVPSLYSTSNTEVPSRRLRIVAVASGDYYAALGVPKSATSKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVNGSMGGASSAYATNPFDLFETFFGPNMGGFSGMDPTGFGTRRRSTVTKGEDIRYDMSLELSEVISGAEKEFDLSHLETCEVCIGTGAKMGSKMIVCTTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEVISEYCGKCSGKGRLRVKKKIKVQVPPGVSSGSILRVAGEGDAGPRGGPPGDLYVYLDVKEIPGIERDGINLCSTITIGYLDAILGATAKIKTVEGISELQIPPGTQPGDVLALARKGVPKLNKPSIRGDHLFAVKVTIPKRISTKERDLLEELALLGNNTASNRSKSRPRTQSSGSTEGPSSQNAESPAPTVSEKAGESEDQNDIWKKLKDLARPLANGALKWLKDNL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1019g00004 494 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 201 281 IPR036410 -
Pral1019g00004 494 FunFam Chaperone protein dnaJ A6 chloroplastic 64 170 - -
Pral1019g00004 494 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pral1019g00004 494 MobiDBLite consensus disorder prediction 426 456 - -
Pral1019g00004 494 SUPERFAMILY Chaperone J-domain 64 173 IPR036869 -
Pral1019g00004 494 CDD DnaJ 67 120 IPR001623 -
Pral1019g00004 494 Gene3D - 330 421 - -
Pral1019g00004 494 Pfam DnaJ C terminal domain 187 405 IPR002939 -
Pral1019g00004 494 SMART dnaj_3 66 123 IPR001623 -
Pral1019g00004 494 Gene3D - 214 278 - -
Pral1019g00004 494 Hamap Chaperone protein DnaJ [dnaJ]. 64 478 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pral1019g00004 494 FunFam Chaperone protein dnaJ A6 chloroplastic 214 278 - -
Pral1019g00004 494 MobiDBLite consensus disorder prediction 426 469 - -
Pral1019g00004 494 Pfam DnaJ domain 67 128 IPR001623 -
Pral1019g00004 494 CDD DnaJ_C 185 408 - -
Pral1019g00004 494 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 416 IPR008971 GO:0006457|GO:0051082
Pral1019g00004 494 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pral1019g00004 494 Gene3D - 184 320 - -
Pral1019g00004 494 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pral1019g00004 494 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pral1019g00004 494 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pral1019g00004 494 PRINTS DnaJ domain signature 123 142 IPR001623 -
Pral1019g00004 494 FunFam Putative Mitochondrial DnaJ chaperone 275 320 - -
Pral1019g00004 494 Pfam DnaJ central domain 214 278 IPR001305 GO:0031072|GO:0051082
Pral1019g00004 494 SUPERFAMILY HSP40/DnaJ peptide-binding domain 182 325 IPR008971 GO:0006457|GO:0051082
Pral1019g00004 494 ProSiteProfiles Zinc finger CR-type profile. 201 283 IPR001305 GO:0031072|GO:0051082
Pral1019g00004 494 NCBIfam molecular chaperone DnaJ 67 420 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pral1019g00004 494 FunFam Chaperone protein dnaJ 1, mitochondrial 325 433 - -
Pral1019g00004 494 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 25 432 - -
Pral1019g00004 494 CDD DnaJ_zf 214 278 IPR001305 GO:0031072|GO:0051082
Pral1019g00004 494 Gene3D DnaJ domain 64 169 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1019g00004 Pral-Chr1019 21497 28497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1019g00004 68 174 C2H2 Transcription Factor Family AT1G74250 38.596 2.72e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1019g00004 K03686 - gmx:100798567 735.717