Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1013g00005 ATGTCTTCGTCTGGTTCGTGGACTGAAAAGGACAACAAAGCCTTTGAAATGGCTCTTGCTGTTTATGACAAGGAAACACCAGACCGCTGGCACAACGTTGCTCAGGCTGTTGGGGGAAATAAAACCCCAGAAGATGTGAAGAAGCAGTACCAAGTCCTTCTAGAAGATCTCAAGCGTATTGAGTCTGGCCAAGTGCCCGATCCTCCTTACAAGTAG 216 0.4769 MSSSGSWTEKDNKAFEMALAVYDKETPDRWHNVAQAVGGNKTPEDVKKQYQVLLEDLKRIESGQVPDPPYK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1013g00005 71 ProSiteProfiles Myb-like domain profile. 1 54 IPR001005 -
Pral1013g00005 71 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 71 IPR044636 GO:0003700
Pral1013g00005 71 Pfam Myb-like DNA-binding domain 5 54 IPR001005 -
Pral1013g00005 71 SMART sant 3 56 IPR001005 -
Pral1013g00005 71 CDD SANT 6 54 IPR001005 -
Pral1013g00005 71 FunFam Transcription factor SRM1 1 67 - -
Pral1013g00005 71 SUPERFAMILY Homeodomain-like 5 62 IPR009057 -
Pral1013g00005 71 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1013g00005 Pral-Chr1013 32795 33197 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral1013g00005 Myb_DNA-binding 9.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1013g00005 - - pcin:129292296 127.102