Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1011g00016 ATGAGTCCTGATAAGCCACTGCTTTCAGAATCAGATTGCTCTTTGGGGATTCATCGCCGTTATCCGAAATCAGGATCCTTCAGCCGCTATGTCTCCTTCCCATCTACCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACATAGACTTTGTATCTGCTGGCGAGTCTAGTTTTCGTAGTGCACTTGAACCTTGCACTTCTGTGACAGAAAAGGACTCTCAATCAGCTGAATCTGAGTTTTGCCAGCAGCTGCCTCTGGAATGCTCCACTCGGGAGAGGAGGCGCCTGACATCGTGGGGTGCAATGGAACAGCATGATATGAATAGCAATACAGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGTCACAAAAGTGTTCAATTTGAAGATAACCTCTTACATGATGACAATTCGAGGTCAATATACATCAATGATCCCAAGAAGACAAATGACAAGTATGAGTTCACGGGGAATGAGATCCGAACTAGTAGATACACAATTATCACCTTCCTCCCTAAGAATCTTTTCATTCAGTTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCGCTAAATCAGCTCCCTCCGCTGGCTGTGTTTGGTAGGACCGTGTCTCTATTTCCCCTCTTGTTTGTTCTGTGTGTCACAGCTATTAAGGATGGTTATGAGGACTGGCGGAGGCACAGGTCGGACCGCAATGAGAACAACCGGGAGTCTCTGGTACTTCAATCTGATGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGTGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCTGTTGACATGGTCTTATTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGTGAATCAAATTTGAAGACGAGGTATGCTCGGCAGGAAATGGCTTCAGTAGTATCACCAGATTGTTGCGCTGTTTCTGGGATCATTAGATGTGAGCAACCAAACAGGAACATTTATGAATTCACAGCCAACATGGAGTTCAATGGGCATAGGTTTCCCCTTAGCCAATCAAATATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGACTGGATAATCGGTGTTGTTGTTTATGCTGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGGTTATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCTGTTGGGATGGGCCTGTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAAGGGCCCTGATAATGGGAAAAGATATAGATATTATGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCGATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACCATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGACAGGGATATGTATGATGCCAACTCCGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGAAGATTTGGGTCAAATACGTTATGTTTTTTCAGACAAGACAGGAACACTTACCGAAAATAAGATGGAATTTCGAAGAGCCAGTATACATGGAAGGAATTATGGGAGCTCATTACTTATGGGTGATAATACAATAGCAGCAGCAGCAGCGTTTTGTGGCAGAGGGAGGTGGAAGCTTAAATCTGAAATTGCTGTTGATTCAGAACTCACAACACTGTTGCATACAGATTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATGCTTAGTCGTGGAACAAGTGAGTCAAATGAGGGTGTAGAATGTATTGAATACCAGGGAGAATCTCCTGATGAACAAGCTTTAGTTGCTGCAGCCTCTGCTTATGGATATACACTTTTTGAGCGGACATCAGGACATATTGTTATTGATGTCAACGGTGAGAGGCTCAGGTTGGATGTTTTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGTTAAAGGAGCTGACACTTCAATGTTTAGCATCTTGGCTGATGAAATTGACAACGGTGATAGCATACGGCATGCAACTCAGGTTCATTTAAATGAATATTGTTTGCAAGGTTTGCGCACACTTGTAGTTGCTTCCAGGAATCTCTCAGATGCAGAACTTGAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCAGCTTTAATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAACAATTGAGTCCTTGCGACAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTCTCCTGCAAACTTTTGACTCCAGATATGGAGATGATAATTATAAATGGCACATCGGAAAATGAATGCAGAAATCTTTTGGCTGATGCAAAAGCCAAATTTGGTATAAGATCTGTATGTAACAGAAACCAGAATATGAGGCACAAAACCAATGATGGACGTGGTGATCTTGAGATGGCCGATAATACAAAGTCTTTAAATATGCCTAGATGTGATCCAAGGGAAGATGCTCCACTGGCACTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGTTGATATGACACTGGCTATTGGTGATGGTGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGTCGTCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAGATTGCTTCTGGTTCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACCGATTGGAGCAGTGTATTCTATTCTGTGATATACACATCAGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAGACACTCCTGCAGTATCCTAAACTGTATGGTGCAGGTCACCGGCATGAGGCTTACAATATGCATTTGTTTTGGATCACAATGATGGACACTCTATGGCAGAGTCTTGTTCTCTTCTACGTACCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGCTTGTGGACAATTGCAGTTGTCGTCCTTGTAAATGTACATTTGGCTATGGACATTAAACATTGGGTATTAATTACACACGTTGCTGTTTGGGGATCGATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCAAACTACTGGACTTTTTATCATGTGGCCAAGTCTCCTACATATTGGATCACAATTTTGCTCATAATTATTGTGGCAATGCTCCCTCGATTTGTCTTTAAAGTTGTTTATCAAGTATTTTGGCCCTCTGAGATCCAGATAGCAAGAGAAGCCGAGATAATAACAAGACATCGTGATCATCTGAGGCCAAGTCAAGACGTTTCTAGCTAA 3846 0.4202 MSPDKPLLSESDCSLGIHRRYPKSGSFSRYVSFPSTIFDETQSGSFDVKDIDFVSAGESSFRSALEPCTSVTEKDSQSAESEFCQQLPLECSTRERRRLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIRHKSVQFEDNLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSDDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASVVSPDCCAVSGIIRCEQPNRNIYEFTANMEFNGHRFPLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFTMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTKGPDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGRNYGSSLLMGDNTIAAAAAFCGRGRWKLKSEIAVDSELTTLLHTDSDRDERIAAHEFFLTLAACNTVIPMLSRGTSESNEGVECIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGERLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFSILADEIDNGDSIRHATQVHLNEYCLQGLRTLVVASRNLSDAELEQWQSMYEEASTSLTDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPETIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTPDMEMIIINGTSENECRNLLADAKAKFGIRSVCNRNQNMRHKTNDGRGDLEMADNTKSLNMPRCDPREDAPLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTVDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLQYPKLYGAGHRHEAYNMHLFWITMMDTLWQSLVLFYVPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIKHWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWITILLIIIVAMLPRFVFKVVYQVFWPSEIQIAREAEIITRHRDHLRPSQDVSS 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1011g00016 1281 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Pral1011g00016 1281 Gene3D - 804 1027 IPR023214 -
Pral1011g00016 1281 SUPERFAMILY Calcium ATPase, transduction domain A 253 394 IPR008250 -
Pral1011g00016 1281 SFLD p-type atpase 526 1038 IPR044492 -
Pral1011g00016 1281 Gene3D - 644 784 IPR023299 GO:0000166
Pral1011g00016 1281 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1254 IPR023298 -
Pral1011g00016 1281 Pfam Phospholipid-translocating P-type ATPase C-terminal 1015 1255 IPR032630 -
Pral1011g00016 1281 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1264 - -
Pral1011g00016 1281 FunFam Phospholipid-transporting ATPase 803 1027 - -
Pral1011g00016 1281 SFLD Haloacid Dehalogenase 526 1038 - -
Pral1011g00016 1281 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Pral1011g00016 1281 Gene3D - 228 398 - -
Pral1011g00016 1281 MobiDBLite consensus disorder prediction 894 918 - -
Pral1011g00016 1281 FunFam Phospholipid-transporting ATPase 649 784 - -
Pral1011g00016 1281 SUPERFAMILY HAD-like 537 1033 IPR036412 -
Pral1011g00016 1281 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 820 IPR023299 GO:0000166
Pral1011g00016 1281 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Pral1011g00016 1281 PRINTS P-type cation-transporting ATPase superfamily signature 987 1006 - -
Pral1011g00016 1281 CDD P-type_ATPase_APLT_Dnf-like 171 1147 - -
Pral1011g00016 1281 Pfam Cation transport ATPase (P-type) 653 728 - -
Pral1011g00016 1281 NCBIfam HAD-IC family P-type ATPase 474 565 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00016 1281 NCBIfam HAD-IC family P-type ATPase 957 1073 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00016 1281 NCBIfam HAD-IC family P-type ATPase 803 855 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00016 1281 Pfam E1-E2 ATPase 254 500 - -
Pral1011g00016 1281 NCBIfam phospholipid-translocating P-type ATPase 169 1262 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1011g00016 Pral-Chr1011 64881 74595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1011g00016 132 1271 Primary Pumps ATPases AT5G04930 57.193 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1011g00016 K14802 - gmx:100812459 2023.44