Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1011g00014 ATGAGTCCTGATAAGCCACTGCTTTCAGAATCAGATTGCTCTTTGGGGATTCATCGCCGTTATCCGAAATCAGGATCCTTCAGCCGCTATGTCTCCTTCCCATCTACCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACATAGACTTTGTATCTGCTGGCGAGTCTAGTTTTCGTAGTGCACTTGAACCTTGCACTTCTGTGACAGAAAAGGACTCTCAATCAGCTGAATCTGAGTTTTGCCAGCAGCTGCCTCTGGAATGCTCCACTCGGGAGAGGAGGCGCCTGACATCGTGGGGTGCAATGGAACAGCATGATATGAATAGCAATACAGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGTCACAAAAGTGTTCAATTTGAAGATAACCTCTTACATGATGACAATTCGAGGTCAATATACATCAATGATCCCAAGAAGACAAATGACAAGTATGAGTTCACGGGGAATGAGATCCGAACTAGTAGATACACAATTATCACCTTCCTCCCTAAGAATCTTTTCATTCAGTTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCGCTAAATCAGCTCCCTCCGCTGGCTGTGTTTGGTAGGACCGTGTCTCTATTTCCCCTCTTGTTTGTTCTGTGTGTCACAGCTATTAAGGATGGTTATGAGGACTGGCGGAGGCACAGGTCGGACCGCAATGAGAACAACCGGGAGTCTCTGGTACTTCAATCTGATGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGTGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCTGTTGACATGGTCTTATTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGTGAATCAAATTTGAAGACGAGGTATGCTCGGCAGGAAATGGCTTCAGTAGTATCACCAGATTGTTGCGCTGTTTCTGGGATCATTAGATGTGAGCAACCAAACAGGAACATTTATGAATTCACAGCCAACATGGAGTTCAATGGGCATAGGTTTCCCCTTAGCCAATCAAATATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGACTGGATAATCGGTGTTGTTGTTTATGCTGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGGTTATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCTGTTGGGATGGGCCTGTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAAGGGCCCTGATAATGGGAAAAGATATAGATATTATGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCGATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACCATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGACAGGGATATGTATGATGCCAACTCCGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGAAGATTTGGGTCAAATACGTTATGTTTTTTCAGACAAGACAGGAACACTTACCGAAAATAAGATGGAATTTCGAAGAGCCAGTATACATGGAAGGAATTATGGGAGCTCATTACTTATGGGTGATAATACAATAGCAGCAGCAGCAGCAGCGTTTTGTGGCAGAGGGAGGTGGAAGCTTAAATCTGAAATTGCTGTTGATTCAGAACTCACAACACTGTTGCATACAGATTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATGCTTAGTCGTGGAACAAGTGAGTCAAATGAGGGTGTAGAATGTATTGAATACCAGGGAGAATCTCCTGATGAACAAGCTTTAGTTGCTGCAGCCTCTGCTTATGGATATACACTTTTTGAGCGGACATCAGGACATATTGTTATTGATGTCAACGGTGAGAGGCTCAGGTTGGATGTTTTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGTTAAAGGAGCTGACACTTCAATGTTTAGCATCTTGGCTGATGAAATTGACAACGGTGATAGCATACGGCATGCAACTCAGGTTCATTTAAATGAATATTGTTTGCAAGGTTTGCGCACACTTGTAGTTGCTTCCAGGAATCTCTCAGATGCAGAACTTGAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCAGCTTTAATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAACAATTGAGTCCTTGCGACAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTCTCCTGCAAACTTTTGACTCCAGATATGGAGATGATAATTATAAATGGCACATCGGAAAATGAATGCAGAAATCTTTTGGCTGATGCAAAAGCCAAATTTGGTATAAGATCTGTATGTAACAGAAACCAGAATATGAGGCACAAAACCAATGATGGACGTGGTGATCTTGAGATGGCCGATAATACAAAGTCTTTAAATATGCCTAGATGTGATCCAAGGGAAGATGCTCCACTGGCACTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGTTGATATGACACTGGCTATTGGTGATGGTGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGTCGTCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAGATTGCTTCTGGTTCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACCGATTGGAGCAGTGTATTCTATTCTGTGATATACACATCAGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAGACACTCCTGCAGTATCCTAAACTGTATGGTGCAGGTCACCGGCATGAGGCTTACAATATGCATTTGTTTTGGATCACAATGATGGACACTCTATGGCAGAGTCTTGTTCTCTTCTACGTACCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGCTTGTGGACAATTGCAGTTGTCGTCCTTGTAAATGTACATTTGGCTATGGACATTAAACATTGGGTATTAATTACACACGTTGCTGTTTGGGGATCGATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCAAACTACTGGACTTTTTATCATGTGGCCAAGTCTCCTACATATTGGATCACAATTTTGCTCATAATTATTGTGGCAATGCTCCCTCGATTTGTCTTTAAAGTTGTTTATCAAGTATTTTGGCCCTCTGAGATCCAGATAGCAAGAGAAGCCGAGATAATAACAAGACATCGTGATCATCTGAGGCCAAGTCAAGACGTTTCTAGCTAA 3849 0.4204 MSPDKPLLSESDCSLGIHRRYPKSGSFSRYVSFPSTIFDETQSGSFDVKDIDFVSAGESSFRSALEPCTSVTEKDSQSAESEFCQQLPLECSTRERRRLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIRHKSVQFEDNLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSDDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASVVSPDCCAVSGIIRCEQPNRNIYEFTANMEFNGHRFPLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFTMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTKGPDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGRNYGSSLLMGDNTIAAAAAAFCGRGRWKLKSEIAVDSELTTLLHTDSDRDERIAAHEFFLTLAACNTVIPMLSRGTSESNEGVECIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGERLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFSILADEIDNGDSIRHATQVHLNEYCLQGLRTLVVASRNLSDAELEQWQSMYEEASTSLTDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPETIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTPDMEMIIINGTSENECRNLLADAKAKFGIRSVCNRNQNMRHKTNDGRGDLEMADNTKSLNMPRCDPREDAPLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTVDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLQYPKLYGAGHRHEAYNMHLFWITMMDTLWQSLVLFYVPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIKHWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWITILLIIIVAMLPRFVFKVVYQVFWPSEIQIAREAEIITRHRDHLRPSQDVSS 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1011g00014 1282 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Pral1011g00014 1282 PRINTS P-type cation-transporting ATPase superfamily signature 988 1007 - -
Pral1011g00014 1282 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Pral1011g00014 1282 SFLD Haloacid Dehalogenase 526 1039 - -
Pral1011g00014 1282 CDD P-type_ATPase_APLT_Dnf-like 171 1148 - -
Pral1011g00014 1282 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1265 - -
Pral1011g00014 1282 MobiDBLite consensus disorder prediction 895 919 - -
Pral1011g00014 1282 NCBIfam phospholipid-translocating P-type ATPase 169 1263 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral1011g00014 1282 Pfam Phospholipid-translocating P-type ATPase C-terminal 1016 1256 IPR032630 -
Pral1011g00014 1282 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 821 IPR023299 GO:0000166
Pral1011g00014 1282 Pfam E1-E2 ATPase 254 500 - -
Pral1011g00014 1282 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Pral1011g00014 1282 Gene3D - 228 398 - -
Pral1011g00014 1282 Gene3D - 805 1028 IPR023214 -
Pral1011g00014 1282 FunFam Phospholipid-transporting ATPase 650 785 - -
Pral1011g00014 1282 Pfam Cation transport ATPase (P-type) 654 729 - -
Pral1011g00014 1282 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1255 IPR023298 -
Pral1011g00014 1282 NCBIfam HAD-IC family P-type ATPase 474 565 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00014 1282 NCBIfam HAD-IC family P-type ATPase 804 856 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00014 1282 NCBIfam HAD-IC family P-type ATPase 958 1074 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00014 1282 FunFam Phospholipid-transporting ATPase 804 1028 - -
Pral1011g00014 1282 SUPERFAMILY Calcium ATPase, transduction domain A 253 394 IPR008250 -
Pral1011g00014 1282 Gene3D - 645 785 IPR023299 GO:0000166
Pral1011g00014 1282 SFLD p-type atpase 526 1039 IPR044492 -
Pral1011g00014 1282 SUPERFAMILY HAD-like 537 1034 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1011g00014 Pral-Chr1011 64881 74595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1011g00014 132 1272 Primary Pumps ATPases AT5G04930 57.230 0.0 1331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1011g00014 K14802 - gmx:100812459 2021.51