Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1011g00013 ATGAGTCCTGATAAGCCACTGCTTTCAGAATCAGATTGCTCTTTGGGGATTCATCGCCGTTATCCGAAATCAGGATCCTTCAGCCGCTATGTCTCCTTCCCATCTACCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACATAGACTTTGTATCTGCTGGCGAGTCTAGTTTTCGTAGTGCACTTGAACCTTGCACTTCTGTGACAGAAAAGGACTCTCAATCAGCTGAATCTGAGTTTTGCCAGCAGCTGCCTCTGGAATGCTCCACTCGGGAGAGGAGGCGCCTGACATCGTGGGGTGCAATGGAACAGCATGATATGAATAGCAATACAGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGTCACAAAAGTGTTCAATTTGAAGATAACCTCTTACATGATGACAATTCGAGGTCAATATACATCAATGATCCCAAGAAGACAAATGACAAGTATGAGTTCACGGGGAATGAGATCCGAACTAGTAGATACACAATTATCACCTTCCTCCCTAAGAATCTTTTCATTCAGTTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCGCTAAATCAGCTCCCTCCGCTGGCTGTGTTTGGTAGGACCGTGTCTCTATTTCCCCTCTTGTTTGTTCTGTGTGTCACAGCTATTAAGGATGGTTATGAGGACTGGCGGAGGCACAGGTCGGACCGCAATGAGAACAACCGGGAGTCTCTGGTACTTCAATCTGATGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGTGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCTGTTGACATGGTCTTATTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGTGAATCAAATTTGAAGACGAGGTATGCTCGGCAGGAAATGGCTTCAGTAGTATCACCAGATTGTTGCGCTGTTTCTGGGATCATTAGATGTGAGCAACCAAACAGGAACATTTATGAATTCACAGCCAACATGGAGTTCAATGGGCATAGGTTTCCCCTTAGCCAATCAAATATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGACTGGATAATCGGTGTTGTTGTTTATGCTGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGGTTATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCTGTTGGGATGGGCCTGTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAAGGGCCCTGATAATGGGAAAAGATATAGATATTATGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCGATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACCATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGACAGGGATATGTATGATGCCAACTCCGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGAAGATTTGGGTCAAATACGTTATGTTTTTTCAGACAAGACAGGAACACTTACCGAAAATAAGATGGAATTTCGAAGAGCCAGTATACATGGAAGGAATTATGGGAGCTCATTACTTATGGGTGATAATACAATAGCAGCAGCAGCGTTTTGTGGCAGAGGGAGGTGGAAGCTTAAATCTGAAATTGCTGTTGATTCAGAACTCACAACACTGTTGCATACAGATTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATGCTTAGTCGTGGAACAAGTGAGTCAAATGAGGGTGTAGAATGTATTGAATACCAGGGAGAATCTCCTGATGAACAAGCTTTAGTTGCTGCAGCCTCTGCTTATGGATATACACTTTTTGAGCGGACATCAGGACATATTGTTATTGATGTCAACGGTGAGAGGCTCAGGTTGGATGTTTTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGTTAAAGGAGCTGACACTTCAATGTTTAGCATCTTGGCTGATGAAATTGACAACGGTGATAGCATACGGCATGCAACTCAGGTTCATTTAAATGAATATTGTTTGCAAGGTTTGCGCACACTTGTAGTTGCTTCCAGGAATCTCTCAGATGCAGAACTTGAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCAGCTTTAATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAACAATTGAGTCCTTGCGACAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTCTCCTGCAAACTTTTGACTCCAGATATGGAGATGATAATTATAAATGGCACATCGGAAAATGAATGCAGAAATCTTTTGGCTGATGCAAAAGCCAAATTTGGTATAAGATCTGTATGTAACAGAAACCAGAATATGAGGCACAAAACCAATGATGGACGTGGTGATCTTGAGATGGCCGATAATACAAAGTCTTTAAATATGCCTAGATGTGATCCAAGGGAAGATGCTCCACTGGCACTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGTTGATATGACACTGGCTATTGGTGATGGTGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGTCGTCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAGATTGCTTCTGGTTCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACCGATTGGAGCAGTGTATTCTATTCTGTGATATACACATCAGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAGACACTCCTGCAGTATCCTAAACTGTATGGTGCAGGTCACCGGCATGAGGCTTACAATATGCATTTGTTTTGGATCACAATGATGGACACTCTATGGCAGAGTCTTGTTCTCTTCTACGTACCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGCTTGTGGACAATTGCAGTTGTCGTCCTTGTAAATGTACATTTGGCTATGGACATTAAACATTGGGTATTAATTACACACGTTGCTGTTTGGGGATCGATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCAAACTACTGGACTTTTTATCATGTGGCCAAGTCTCCTACATATTGGATCACAATTTTGCTCATAATTATTGTGGCAATGCTCCCTCGATTTGTCTTTAAAGTTGTTTATCAAGTATTTTGGCCCTCTGAGATCCAGATAGCAAGAGAAGCCGAGATAATAACAAGACATCGTGATCATCTGAGGCCAAGTCAAGACGTTTCTAGCTAA 3843 0.42 MSPDKPLLSESDCSLGIHRRYPKSGSFSRYVSFPSTIFDETQSGSFDVKDIDFVSAGESSFRSALEPCTSVTEKDSQSAESEFCQQLPLECSTRERRRLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIRHKSVQFEDNLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSDDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASVVSPDCCAVSGIIRCEQPNRNIYEFTANMEFNGHRFPLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFTMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTKGPDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGRNYGSSLLMGDNTIAAAAFCGRGRWKLKSEIAVDSELTTLLHTDSDRDERIAAHEFFLTLAACNTVIPMLSRGTSESNEGVECIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGERLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFSILADEIDNGDSIRHATQVHLNEYCLQGLRTLVVASRNLSDAELEQWQSMYEEASTSLTDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPETIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTPDMEMIIINGTSENECRNLLADAKAKFGIRSVCNRNQNMRHKTNDGRGDLEMADNTKSLNMPRCDPREDAPLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTVDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLQYPKLYGAGHRHEAYNMHLFWITMMDTLWQSLVLFYVPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIKHWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWITILLIIIVAMLPRFVFKVVYQVFWPSEIQIAREAEIITRHRDHLRPSQDVSS 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1011g00013 1280 Gene3D - 803 1026 IPR023214 -
Pral1011g00013 1280 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Pral1011g00013 1280 NCBIfam HAD-IC family P-type ATPase 802 854 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00013 1280 NCBIfam HAD-IC family P-type ATPase 956 1072 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00013 1280 NCBIfam HAD-IC family P-type ATPase 474 565 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1011g00013 1280 SUPERFAMILY Calcium ATPase, transduction domain A 253 394 IPR008250 -
Pral1011g00013 1280 SFLD C1.7: P-type atpase like 526 1037 - -
Pral1011g00013 1280 Gene3D - 644 783 IPR023299 GO:0000166
Pral1011g00013 1280 Pfam Cation transport ATPase (P-type) 652 727 - -
Pral1011g00013 1280 CDD P-type_ATPase_APLT_Dnf-like 171 1146 - -
Pral1011g00013 1280 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Pral1011g00013 1280 Gene3D - 228 398 - -
Pral1011g00013 1280 FunFam Phospholipid-transporting ATPase 648 783 - -
Pral1011g00013 1280 NCBIfam phospholipid-translocating P-type ATPase 169 1261 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral1011g00013 1280 Pfam Phospholipid-translocating P-type ATPase C-terminal 1014 1254 IPR032630 -
Pral1011g00013 1280 MobiDBLite consensus disorder prediction 893 917 - -
Pral1011g00013 1280 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1253 IPR023298 -
Pral1011g00013 1280 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 819 IPR023299 GO:0000166
Pral1011g00013 1280 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1263 - -
Pral1011g00013 1280 FunFam Phospholipid-transporting ATPase 802 1026 - -
Pral1011g00013 1280 Pfam E1-E2 ATPase 254 500 - -
Pral1011g00013 1280 PRINTS P-type cation-transporting ATPase superfamily signature 986 1005 - -
Pral1011g00013 1280 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Pral1011g00013 1280 SFLD p-type atpase 526 1037 IPR044492 -
Pral1011g00013 1280 SUPERFAMILY HAD-like 537 1032 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1011g00013 Pral-Chr1011 64880 74595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1011g00013 132 1270 Primary Pumps ATPases AT5G04930 57.068 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1011g00013 K14802 - gmx:100812459 2026.14