LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1011g00010	ATGGTTTCCTCTCAGTTTTCTGATTTGCCTAAGAATGGCGTTTGCAAACCATTCCAAACCCAAAGACTCTTTCCTACAAGTCTCACTGACAATGTAATTACGGACCAACTTGAGCTTGATTTCTCTGATGTCTTTGGTCCAGTTACAGTGCCTTCTATAGAAGTGAATGATGTTGATTCTGCTATTGTTGAGCTTGAGGAAGAATCAAGTGAACTCGTTTATGATGATCCAGCTGTCATTTATACCCGCTCACATTCATTAGTTGGCCCTTCTACCTGTGTTAGCCAATCACTTAAGCTTGGAAAACTCACTTTACATGGAGATGAGGATTCATTGGAAGCAGCGGAGCATGCTGCTGGAGAGACCATTAAAGAAGTTGATGAATCGAATGTCAACATTGCCATCATTGAAGAATCTCTTGAATGTGATAATGGTCATCTTGTGAAGATCCAGGGAGTGAGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGACAGGGAGCATTTGCAAAAGTCTACCAGGTGAGGAAAAAGGGTACTTCTGAAATATATGCAATGAAGGTAATGAGAAAGGACAAAATCATGGAAAAGAACCATGCTGAATACATGAAAGCTGAGAGGGATATTTTAACCCAAATAGAGCACCCCTTTATTGTTCAGCTCAGATACTCTTTTCAGACAAAATACAGATTGTATCTAGTGCTGGATTTTGTAAATGGGGGTCATCTTTTCTTTCAGCTTTATCATCAAGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGCTGAGATTGTTTCTGCAGTTTCCCATCTCCACACAAACGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTGCTGGATGCTGATGGCCATGTTATGCTGACGGATTTTGGCCTGGCCAAGCAATTTGAAAGTGATACAAGGTCTAATTCCATGTGTGGAACAATAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTTGGAATCCTACTGTATGAGATGCTTACTGGAAAGCCTCCCTTCTGTGGCGGAAACCGTGAGAAGATTCAACAGAAAATAATTAAAGACAAGATCAAGCTGCCAGCATTTTTGTCTAGTGAGGCACATTCCCTGTTGAAAATGCTTCTGCAGAAAGACGCGACTAAGCGATTAGGCAGTGGGACAAGGGGAAGCTTGGAAATTAAAAATCATAAGTGGTTTAAACCAATCAATTGGAGGAAGTTGGATTCACGTGAGGTCCAACCAAGCTTTCGCCCTGAAGTTGCTGGAAAGCATTGTGTTGCCAACTTTGAGAAGCGCTGGACCGATATGCCCATCGTCGACTCCCCGGCTGCTAGTCCAAATGGTGTCAATCTTTTCAAAGACTTCAGTTATGTGAGATCTGCAGCTTCCTTCCTTCAAAGGAATAGCCCTTCTTGCTAG	1467	0.4233	MVSSQFSDLPKNGVCKPFQTQRLFPTSLTDNVITDQLELDFSDVFGPVTVPSIEVNDVDSAIVELEEESSELVYDDPAVIYTRSHSLVGPSTCVSQSLKLGKLTLHGDEDSLEAAEHAAGETIKEVDESNVNIAIIEESLECDNGHLVKIQGVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTQIEHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAAEIVSAVSHLHTNGIMHRDLKPENILLDADGHVMLTDFGLAKQFESDTRSNSMCGTIEYMAPEIILGKGHDKAADWWSVGILLYEMLTGKPPFCGGNREKIQQKIIKDKIKLPAFLSSEAHSLLKMLLQKDATKRLGSGTRGSLEIKNHKWFKPINWRKLDSREVQPSFRPEVAGKHCVANFEKRWTDMPIVDSPAASPNGVNLFKDFSYVRSAASFLQRNSPSC	488

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pral1011g00010	488	CDD	STKc_AGC	164	415	IPR045270	GO:0004674\|GO:0005524
Pral1011g00010	488	ProSitePatterns	Protein kinases ATP-binding region signature.	164	187	IPR017441	GO:0005524
Pral1011g00010	488	Gene3D	Phosphorylase Kinase; domain 1	155	456	-	-
Pral1011g00010	488	SUPERFAMILY	Protein kinase-like (PK-like)	155	477	IPR011009	-
Pral1011g00010	488	Gene3D	Transferase(Phosphotransferase) domain 1	238	434	-	-
Pral1011g00010	488	FunFam	Non-specific serine/threonine protein kinase	155	260	-	-
Pral1011g00010	488	ProSiteProfiles	AGC-kinase C-terminal domain profile.	416	483	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
Pral1011g00010	488	Pfam	Protein kinase domain	158	415	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral1011g00010	488	PANTHER	RIBOSOMAL PROTEIN S6 KINASE	125	477	-	-
Pral1011g00010	488	ProSiteProfiles	Protein kinase domain profile.	158	415	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1011g00010	Pral-Chr1011	40306	44438	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1011g00010	1	485	AGC Kinase Gene Family	AT3G08720	68.098	0.0	656

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC-Pl	Pral1011g00010		Pkinase	2.1e-74	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1011g00010	K04688		-	gmx:100805922	771.541

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