Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1011g00010 ATGGTTTCCTCTCAGTTTTCTGATTTGCCTAAGAATGGCGTTTGCAAACCATTCCAAACCCAAAGACTCTTTCCTACAAGTCTCACTGACAATGTAATTACGGACCAACTTGAGCTTGATTTCTCTGATGTCTTTGGTCCAGTTACAGTGCCTTCTATAGAAGTGAATGATGTTGATTCTGCTATTGTTGAGCTTGAGGAAGAATCAAGTGAACTCGTTTATGATGATCCAGCTGTCATTTATACCCGCTCACATTCATTAGTTGGCCCTTCTACCTGTGTTAGCCAATCACTTAAGCTTGGAAAACTCACTTTACATGGAGATGAGGATTCATTGGAAGCAGCGGAGCATGCTGCTGGAGAGACCATTAAAGAAGTTGATGAATCGAATGTCAACATTGCCATCATTGAAGAATCTCTTGAATGTGATAATGGTCATCTTGTGAAGATCCAGGGAGTGAGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGACAGGGAGCATTTGCAAAAGTCTACCAGGTGAGGAAAAAGGGTACTTCTGAAATATATGCAATGAAGGTAATGAGAAAGGACAAAATCATGGAAAAGAACCATGCTGAATACATGAAAGCTGAGAGGGATATTTTAACCCAAATAGAGCACCCCTTTATTGTTCAGCTCAGATACTCTTTTCAGACAAAATACAGATTGTATCTAGTGCTGGATTTTGTAAATGGGGGTCATCTTTTCTTTCAGCTTTATCATCAAGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGCTGAGATTGTTTCTGCAGTTTCCCATCTCCACACAAACGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTGCTGGATGCTGATGGCCATGTTATGCTGACGGATTTTGGCCTGGCCAAGCAATTTGAAAGTGATACAAGGTCTAATTCCATGTGTGGAACAATAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTTGGAATCCTACTGTATGAGATGCTTACTGGAAAGCCTCCCTTCTGTGGCGGAAACCGTGAGAAGATTCAACAGAAAATAATTAAAGACAAGATCAAGCTGCCAGCATTTTTGTCTAGTGAGGCACATTCCCTGTTGAAAATGCTTCTGCAGAAAGACGCGACTAAGCGATTAGGCAGTGGGACAAGGGGAAGCTTGGAAATTAAAAATCATAAGTGGTTTAAACCAATCAATTGGAGGAAGTTGGATTCACGTGAGGTCCAACCAAGCTTTCGCCCTGAAGTTGCTGGAAAGCATTGTGTTGCCAACTTTGAGAAGCGCTGGACCGATATGCCCATCGTCGACTCCCCGGCTGCTAGTCCAAATGGTGTCAATCTTTTCAAAGACTTCAGTTATGTGAGATCTGCAGCTTCCTTCCTTCAAAGGAATAGCCCTTCTTGCTAG 1467 0.4233 MVSSQFSDLPKNGVCKPFQTQRLFPTSLTDNVITDQLELDFSDVFGPVTVPSIEVNDVDSAIVELEEESSELVYDDPAVIYTRSHSLVGPSTCVSQSLKLGKLTLHGDEDSLEAAEHAAGETIKEVDESNVNIAIIEESLECDNGHLVKIQGVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTQIEHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAAEIVSAVSHLHTNGIMHRDLKPENILLDADGHVMLTDFGLAKQFESDTRSNSMCGTIEYMAPEIILGKGHDKAADWWSVGILLYEMLTGKPPFCGGNREKIQQKIIKDKIKLPAFLSSEAHSLLKMLLQKDATKRLGSGTRGSLEIKNHKWFKPINWRKLDSREVQPSFRPEVAGKHCVANFEKRWTDMPIVDSPAASPNGVNLFKDFSYVRSAASFLQRNSPSC 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1011g00010 488 CDD STKc_AGC 164 415 IPR045270 GO:0004674|GO:0005524
Pral1011g00010 488 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Pral1011g00010 488 Gene3D Phosphorylase Kinase; domain 1 155 456 - -
Pral1011g00010 488 SUPERFAMILY Protein kinase-like (PK-like) 155 477 IPR011009 -
Pral1011g00010 488 Gene3D Transferase(Phosphotransferase) domain 1 238 434 - -
Pral1011g00010 488 FunFam Non-specific serine/threonine protein kinase 155 260 - -
Pral1011g00010 488 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral1011g00010 488 Pfam Protein kinase domain 158 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1011g00010 488 PANTHER RIBOSOMAL PROTEIN S6 KINASE 125 477 - -
Pral1011g00010 488 ProSiteProfiles Protein kinase domain profile. 158 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1011g00010 488 FunFam Non-specific serine/threonine protein kinase 238 434 - -
Pral1011g00010 488 SMART serkin_6 158 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1011g00010 488 SMART pkinase_C_6 416 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral1011g00010 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1011g00010 Pral-Chr1011 40306 44438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1011g00010 1 485 AGC Kinase Gene Family AT3G08720 68.098 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pral1011g00010 Pkinase 2.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1011g00010 K04688 - gmx:100805922 771.541