Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1011g00006 ATGAGGGACATCAAAGGGTTTCTTCCTTGGATTCTTCTCTTAGCTTTTCAAGTTGTTCAAGCTGCGGATTATGTGCCGTCTGATAAAATATTCTTGAGCTGTGGTGGTCCTCCAGATTCAACCGATACTGATGGAAGAAAATGGACTTCTGATGTTGGGTCGAAGTTCTTATCGTCTACGGGCAAGTCCAAGAAATCTGAGGCTGCAACACAAGACCCGTCCGTGCCGGAAGTTCCGTTTGTGACGGCGCGTGTGTTTGAGTCGGAATTCACCTACTCTTTTCCGGTGGCAGCTGGTCGGAAATTCATCCGTCTCTACTTCTACCCTTCTTCTTATGACGGACTTAACGCCTCCAATGCGATTTTCTCCGTCACTGCTCAATCCTACACGCTTCTTAGGAACTTCAGTGCTGCTCAAACGGTATCAGCTTTGAACTATGTCTCTCTTGTGAAAGAATATTTGGTCAATGTTGAAGGAGATTCGCTGAATGTAACCTTTACTCCATCTCCTAATGCTTCTAATGCATATGCCTTTGTTAATGGGATTGAGATTGTGTCTATGCCTCCTGATATTTATGCTTCTCCTACTGAAAATCCTGTGATTGTGGGCACACAAACTCCTTACACTTTTGATAATAGTACTGCCCTTGAGACTGTTTATAGGCTTAATGTTGGTGGGAATGATATTTCGCCTTCCCACGATACTGGTTTGTTCAGGTCATGGAATGATGATACTATTTATCTTTATGGTGCTGCTTTTGGAGTCACTGAGCCTGCTGATCCTGAGGTTAACATCACGTATCCTCCAGACACACCCTCTTATGTTGCTCCTGTTGATGTCTACTCTACGGCTAGATCAATGGGGCCAAATGCTGATATCAATAAGAATTACAAATTGACTTGGATTTTCTCCATTGATTCTGGTTTTTCCTATCTTGTGAGACTCCATTTTTGTGAGGGTACTACCAATATCACCAAGGTTAATCAAAGGGTGTTTGATATATTCCTTGGTAATCAAACTGCTGAAGACGAAGCAGATGTTATTGCATGGGCGAAGAGCCAATATAATCTTCCACATGATAATGGGGTTCCAGTGCATAGGGATTATGTTGTGTTTGTTCCTGTTGGGCAGCCACAACAGGATCTGTGGCTTGCACTACATCCAGATACTAAGTCACAGTCTGAGTACTATGATGCAATATTGAATGGAGTGGAGATATTCAAAATTAATGATCCTGCTGGTAATCTTGCTGGGCTGAATCCTATTCCTGCTCCAAAGCAAGATGTTATCGATCCATCATTGGCTAGGAGCTCAAGTAAGGGCCAATCGAAGGTTCAGAAAGGAGCAATTGCTGGAGGTGTTAGTGGGGGAGTAGTTCTATTACTTGTTGTTGGGCTCATTGCCTTTGCTGCTTCGCGTCGTAGGAGGCATGGCAAGAAGGATTCCGGTACAAGCGAAGGCCCATCTGGCTGGCTTCCTCTTTCTCTTTATGGTAACTCCCATTCTGCTGGTTCTGCCAAGACCAACACAACAGGAAGCTATGCATCATCGCTCCCATCAAACCTTTGTAGGCATTTCTCGTTTGCTGAAATCCAGGCTGCGACAAACAACTTTGATGAGGCTTTGCTCCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAAGGAGAGATTGATGGTGGAACGACCAAAGTAGCAATTAAACGTGGGAATCCTCTTTCTGAGCAGGGTGTACATGAGTTCCAAACAGAGATTGAAATGCTCTCTAAACTTCGCCACCGGCATCTTGTTTCGCTGATTGGCTACTGTGAAGAGAACACTGAAATGATCCTTGTCTATGACTACATGGCTCATGGAACTCTCCGGGAGCATCTATACAAGACCCAGAAACCTCCTCTGCCATGGAAGCAAAGGCTTGAGATATGCGTTGGATCTGCTCGAGGTTTACACTATCTACATACTGGTGCCAAGCACACTATCATCCATAGAGATGTGAAGACTACCAACATCTTACTGGATGAGAAATGGGTAGCAAAGGTTTCTGATTTTGGATTGTCAAAAACTGGTCCCACATTGGATAACACCCATGTGAGCACCGTAGTTAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAACAACTGACTGATAAATCTGATGTTTACTCCTTCGGGGTGGTTCTTTTCGAGATCTTGTGCGCTCGCCCAGCTTTGAACCCAACCCTTCCAAAAGAGCAAGTGAGCTTAGCAGAGTGGGCTGCTCATTGCTACAACAAGGGCATTCTTGACCAGCTCGTTGATCCTTACTTGAAGGGCAAGATAGCCCCAGAATGCTTCAAAAAGTTTGCCGAGACTGCAATGAAGTGCGTCGCCGATCAGGGCATCGAGAGGCCATCGATGGGGGATGTGCTGTGGAACCTCGAGTTCGCTTTGCAGCTGCAAGAGAGTGCAGAAGAGAGTGGCAAGGGCGGCATTGGAGGAATGCATGACATTGACGAGGAGGAACCACTGTATGTGAACTCCAAGGGGAAGAAGGACCCGAACGACGCATTGCCAGGTTTCGACGGTAATGTAACCGATTCCCGAAGCTCAGGAATGAGTATGAGCATTGGTGGTCGGAGCTTGGCCAGTGAAGACTCTGATGGGTTAACACCAAGCGCTGTGTTTTCTCAGATCATGAACCCAAAAGGGCGTTAA 2703 0.4576 MRDIKGFLPWILLLAFQVVQAADYVPSDKIFLSCGGPPDSTDTDGRKWTSDVGSKFLSSTGKSKKSEAATQDPSVPEVPFVTARVFESEFTYSFPVAAGRKFIRLYFYPSSYDGLNASNAIFSVTAQSYTLLRNFSAAQTVSALNYVSLVKEYLVNVEGDSLNVTFTPSPNASNAYAFVNGIEIVSMPPDIYASPTENPVIVGTQTPYTFDNSTALETVYRLNVGGNDISPSHDTGLFRSWNDDTIYLYGAAFGVTEPADPEVNITYPPDTPSYVAPVDVYSTARSMGPNADINKNYKLTWIFSIDSGFSYLVRLHFCEGTTNITKVNQRVFDIFLGNQTAEDEADVIAWAKSQYNLPHDNGVPVHRDYVVFVPVGQPQQDLWLALHPDTKSQSEYYDAILNGVEIFKINDPAGNLAGLNPIPAPKQDVIDPSLARSSSKGQSKVQKGAIAGGVSGGVVLLLVVGLIAFAASRRRRHGKKDSGTSEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIQAATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICVGSARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCYNKGILDQLVDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGGIGGMHDIDEEEPLYVNSKGKKDPNDALPGFDGNVTDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1011g00006 900 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
Pral1011g00006 900 SMART serkin_6 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1011g00006 900 Gene3D Single helix bin 436 476 - -
Pral1011g00006 900 MobiDBLite consensus disorder prediction 841 900 - -
Pral1011g00006 900 Gene3D Transferase(Phosphotransferase) domain 1 615 827 - -
Pral1011g00006 900 Pfam Protein tyrosine and serine/threonine kinase 544 806 IPR001245 GO:0004672|GO:0006468
Pral1011g00006 900 MobiDBLite consensus disorder prediction 859 893 - -
Pral1011g00006 900 FunFam Receptor-like protein kinase FERONIA 510 614 - -
Pral1011g00006 900 FunFam Receptor-like protein kinase FERONIA 615 825 - -
Pral1011g00006 900 SUPERFAMILY Protein kinase-like (PK-like) 513 811 IPR011009 -
Pral1011g00006 900 Gene3D - 30 187 - -
Pral1011g00006 900 Gene3D - 214 410 - -
Pral1011g00006 900 ProSiteProfiles Protein kinase domain profile. 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1011g00006 900 PANTHER OS03G0124300 PROTEIN-RELATED 13 479 IPR046957 GO:0004672
Pral1011g00006 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Pral1011g00006 900 CDD STKc_IRAK 544 810 - -
Pral1011g00006 900 Pfam Malectin-like domain 32 409 IPR024788 -
Pral1011g00006 900 FunFam FERONIA receptor-like kinase 214 410 - -
Pral1011g00006 900 FunFam FERONIA receptor-like kinase 29 188 - -
Pral1011g00006 900 Gene3D Phosphorylase Kinase; domain 1 500 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1011g00006 Pral-Chr1011 29397 32734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1011g00006 15 900 Receptor kinase-like Gene Family AT3G51550 73.986 0.0 1310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral1011g00006 Malectin_like 9e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1011g00006 - - qsa:O6P43_016455 1434.47