Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1006g00013 ATGGCAACCTTCTTCAAACCTCTACCCAGAAAAGTTTCGGTCTTCCTCAACATATCCTTTCTCTTGATTCTCTCTCTCTTTCTCAAATCCTATCTCTACCCCTCCTATTCCAATTCTCATCATGAATCATCCAATAATTCCCCTTCCATTTTCAACCGCCACACTCGGATCCTCCAGGAGATCACGCCAGATTCATGCACAGGTCTTCATGAGCTCTCAGATTATAGATCAAAGTGCTTGTACGTCAAAACCCATTCTGAGTGCAGGTCAAAAGGCTACATAAACTATCTCTATATCTTTTACTGCAACCTTGGCCAATCACCAATCATGGGTCATTTTTTGCTTATATTATGGCTTGCGGTGTTGTTCTACCTCTTGGGCGACACTGCTTCTAATTACTTCTGCTACTCCTTGGAGAGTCTGTCCAATATCTTGAAGTTGTCTCCCACCATAGCAGGAGTCACTTTGCTTTCTCTGGGAAATGGAGCTCCTGACTTTTTTGCAAGTGTTGTTTCCTTCACAAGATCCAGCAATGGTGCAGTTGGGCTTAACAGCATTCTTGGAGGGGCATTTTTCGTCTCAAGTGCTGTCTTGGGGATTATAAGTATTCTGGTTAGCACAAAGCAGATTGCAGTTGACAAGGCCAGTTTCATTAGAGATGTTCTGTTCTTCCTTTTCTCTCTGCTCGTCCTCCTTCTCATCATTTCCATTGGCAAAATTACCTTGTTGGGCTCAATCTGCTATGTCTCCATCTACTTCCTTTATGTCTGTGCAGTCTCTGCCACACATTTTATCTATGGAGGGGAGAAGAAAGAAAACGAATGCTTTGCTATATCTGCTGATGATCTTGTAGAGTCTGGCATACCATTGTTAGGCTGCGTTGATGATGAGAAACCAAGTTTAGCAGAGAAAGTGGCTGCAGAAGATAACAAAGAAAAGCCAGAGTGTTTTGAGGGCGCTTCATTTAAATGGAATTATTACATGGGCAAATTTCTACAAGTGCTAGAACTACCTCTCAGCTTGCCAAGAAAACTCACCATACCAGTTGTGAATGAAGAGAGATGGTCAAAGCCATATGCAGTAATATCTGTCACATTAGCACCAGTTCTGATAGCACTTATCTGCAACACCCAGAAGGAAAATGAGGATTCTAGGACAATTCTGGTCACATACTTAATAGCTGCTCTGATTGGGGTGTTTCTGGGAAATATGGCCTGTGTGACCACAAACAGCACTAGCCCCCCAACAATGTGCCTATTTCCTTGGCTAGCAGGAGGTTTTGCCATGAGTGTGACATGGACATATATTATCGCTGAGGAATTGGTTTCCTTGTTAGTTTCAATTGGGAATATAATTGGGGTTAGTCCTTCAATTCTTGGGTTAACAGTCCTAGCTTGGGGTAACTCTCTTGGGGATCTAATAGCCAATGGTGCTATGGCAGTTAATGGTGGGGTAGATGGGGCTCAAATAGCTATATCCGGGTGTTATGCGGGTCCCATGTTTAACACTTTGATGGGTTTGGGATTTCCTTTGGTTCTTTCAGCTTGGTCTGAGTATCCAAATCCATATGTAATCCCTAAGGACCGTTCTCTCTACGAGACTCTTATGTTCTCGATGGGAGGGTTGTTGTGGGCCCTTGTGGTGTTGCCAAAGAGAAACATGAGGCTAGATAAGTTCTTGGGATCGGGACTCTTGATCATATACCTTTGTTTCCTTTTCATAAGGATGGCAATGGCAATTGGTATTGTGAAGTTCTAG 1758 0.4312 MATFFKPLPRKVSVFLNISFLLILSLFLKSYLYPSYSNSHHESSNNSPSIFNRHTRILQEITPDSCTGLHELSDYRSKCLYVKTHSECRSKGYINYLYIFYCNLGQSPIMGHFLLILWLAVLFYLLGDTASNYFCYSLESLSNILKLSPTIAGVTLLSLGNGAPDFFASVVSFTRSSNGAVGLNSILGGAFFVSSAVLGIISILVSTKQIAVDKASFIRDVLFFLFSLLVLLLIISIGKITLLGSICYVSIYFLYVCAVSATHFIYGGEKKENECFAISADDLVESGIPLLGCVDDEKPSLAEKVAAEDNKEKPECFEGASFKWNYYMGKFLQVLELPLSLPRKLTIPVVNEERWSKPYAVISVTLAPVLIALICNTQKENEDSRTILVTYLIAALIGVFLGNMACVTTNSTSPPTMCLFPWLAGGFAMSVTWTYIIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAVNGGVDGAQIAISGCYAGPMFNTLMGLGFPLVLSAWSEYPNPYVIPKDRSLYETLMFSMGGLLWALVVLPKRNMRLDKFLGSGLLIIYLCFLFIRMAMAIGIVKF 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1006g00013 585 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 15 583 - -
Pral1006g00013 585 Pfam Sodium/calcium exchanger protein 117 258 IPR004837 GO:0016020|GO:0055085
Pral1006g00013 585 Pfam Sodium/calcium exchanger protein 423 575 IPR004837 GO:0016020|GO:0055085
Pral1006g00013 585 Gene3D - 147 277 IPR044880 -
Pral1006g00013 585 Gene3D - 360 578 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1006g00013 Pral-Chr1006 66461 68642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1006g00013 64 584 Antiporters AT5G17860 54.493 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1006g00013 K13754 - gmx:100818583 814.683