Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02258 ATGAAACTGGTTGTGGAGGTTATTAATGCTCATGATCTTATGCCAAAAGATGGTGAAGGATCAGCCAGCCCCTTTGTGGAAGTAGACTTCGAAAACCAGCTTAGCCGAACCAGAACTGTCCCAAAGAACCTCAACCCCACCTGGAACCAAAAACTAATCTTCCATTTGGATGCAACCAAACCTTACCATCGCCAAACTATTGAAGTATCTGTTTACAACGAGAGGAGACTTACTCCAGGCAGAAACTTCCTTGGAAGGGTGAGAATTCCTTGCTCCAACATTGTCAAGGAAGGTGAAGAAGTGTATCAGATTTTCCCACTTGAAAATAAATGGTTTCTCTCACCTGTTAAGGGTGAGATTGGCCTCAAAATATACATTGCATCTGAGTCCAACTCCAAACCAAAACCTCTTTCTCCTGTTTTTCCTTCAGAACTAGAAAAACTCCCACCTTCTACTCCACTCCAAGCACCAGAATCAACAACTAGTACTACCCTTCCTCCTCCTCGTATCATTCCCTCAGACAGCACAACATCAGAAGCTGGTTCCATTGAAGAACTTCCTACATTTGACACCCCAAAATCAAGTATAGAAGAAGCAGAAGTATATTCTGGTGCACAAGTTCGGTCTAGTGGCGTTATCGATCCAGAGCCAAAGGAAGAAAGTAGAGAAGCTGTGCCAGAGACAACCCAACAACTAGACAAGCACCAAGTTCTCCAGCCGCAGATGATTTCAATAAAGAGAAGACCACCAGGTACTCCATCCGCCATGCACTCAGTTGATCCTCAAGTCCAATCTAGTCATCATGAAAACTATAATCACAATGACACCAATCCACAGCCTAGGATTTCAATAAAGAGACGACCACAAGCACAAGGTTCTGCTTTCACAATGCACTCGGTTGATCCACAAGTCCAACCAAGCTACGTTGAAGGCTACAATCATAATGACACCAACCAGAAGCCAAGAATTTCAATCAAGAGACGACCACGAGGACCCGGTACTCCATCACCAATGCGCTCTTTTGATCCACAAGTCCATGCGAGTCATGATGAAGCCTACAACCTCATGGGAACCAACCCACAACAGCCAAGAATTTTAGTAGAGAGACCGCAGAATACTCCACTCACCACGCACCAAGTTAGTCCCCAAGTCCCTACTGGCCTTGATGAAAACTACAATCTCAGTGACACCAATGCACGTCTTGGAGAACGGTGGCCTAGTGGTGGAGCTTATGGTCGAAGAGGGTGGATGAGTGGTAGTGACAGATTCACTAGTACATTTGACCTTGTTGAGCAGATGTATTATCTGTATGTTCGTGTTGTGAAGGCGAAAGATCTTCCCGCAAGCACCATCACCTCAAGCTGTGATCCTTATGTGGAAGTGAAGCTGGGAAACTACAAGGGAAGAACAAAGCACTTTGATCATAAATTGAACCCGGAATGGAACCAAGTGTTTGCTTTCTCCAAAGACCGCATTCAGTCTTCTGTTTTAGAAGTCTTTGTGAAAGATAAAGCAACGGTGGGGAGAGATGACTATCTTGGAAGGGTGGTTTTTGACCTCAATGAAGTTCCAACAAGAGTTCCACCAGATAGTCCACTAGCTCCTCAGTGGTATCGGCTTGAGGACTGGCGCGAAGAAGGCAAGGTGAGGGGTGACATTATGCTTGCAGTTTGGATGGGAACACAAGCTGACGAGGCTTTCTCAGATGCTTGGCATTCTGATGCTGCCACTGTCTATGGAGAGGGTGTTTTCAACATCAGATCCAAGGTATACATGTCCCCAAAACTGTGGTATCTCAGGGTGAATGTCATTGAAGCTCAAGATGTAATACCGGGTGACAGAAACCGGCTACCTGAGGTTTTTGTGAAAGCTCAAGTGGGCCGCCAAGTACTAACAACCAAGATATGCCCCACCAGAACAACCACCCCATTTTGGAATGAAGATTTGGTTTTTGTAGCCTGTGAGCCATTTGAGGAGCAATTAACAATCACTGTGGAGGATCGTGTGCACCCTTCAAAAGATGAGGTGCTTGGGAAGATAAGCCTACCAATGACCCTCTTTGAGAAGCGGTTAGACCAAAGGCCGGTTCATTCGCGCTGGTTCAGTCTAGAGAAATTTGGTTTTGGAATGTTAGAAGGTGATAGAAGAAATGAGCTCAAGTTTTCAAGCAGGATTCACATGAGAGTGTGCCTTGAGGGTGGATACCATGTCCTAGATGAGTCCACATTGTACAGTAGTGATCAAAGACCAACAGCGAGACAACTATGGAAGCAACCTATTGGGATACTTGAAGTAGGCATCTTAGGAGCTCAAGGGCTTCTCCCGATGAAGATGAGGGATGGCAGAGGCAGCACGGATGCATACTGTGTTGCCAAGTATGGTCAGAAATGGGTCAGAACAAGAACACTGCTTGACACTTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTCATAACATTGGGAGTTTTTGACAACTGCCATTTAGGTGGAGAAAAAGCTATAGGTGATAGCAATGCTGCTAGAGATTCTCGGATTGGAAAGGTAAGAATAAGGCTATCAACACTTGAAGCTAATAGAATTTACACCAATTCTCACCCTCTTCTTGTTCTACACCCACACGGGGTTAAGAAGATGGGAGAGCTTCAGTTAGCAGTGAGGTTCACAGCACTCTCACTGGCAAACATGGTTCATATCTATGGCCAACCTTTGCTTCCCAAGATTCATTACTTACATCCTTTCACAGTTAACCAAATAGACAACTTACGGTACCAAGCAATGAACATTGTGGCTGCGAGGTTAGGCAGAGCCGAACCCCCTCTGAGGAAGGAAGTGGTGGAGTACATGTTGGATGTTGATTCCCATTTGTGGAGCATGAGAAGAAGCAAGGCTAACTTCTTCCGCATCATGTCACTTTTCTCTGGTATGATCACAATGGGAAAGTGGTTCAGTGATGTTTGCCTCTGGAAGAACCATGTTACATCAATCCTAGTTCACATCCTCTTCCTTATACTGATATGGTACCCCGAATTGATCCTACCAACTGTGTTTCTGTACATGTTCCTGATTGGTCTGTGGAACTACAGGTTCCGGCCCAGACACCCTCCTCACATGGATACCAAACTCTCCTGGGCTGAAGCTGTTCATCCAGACGAACTTGATGAAGAGTTTGACACGTTTCCAACTTCAAGATCACAAGATGTTGTGAGAATGAGGTATGACAGGCTCAGAACTGTGGCAGGAAGGATTCAGACAGTTGTTGGGGACATTGCTACACAAGGGGAGAGGTTTCAGTCTCTACTGAGTTGGAGAGACCCCAGAGCAAGCAGCATCTTTGTGGTGTTTAGCTTTTGTGCTGCTGTGACTCTCTATGCAACACCATTCAGAGTGGTGGCTCTGGTTACAGGCTTGTACTTTTTGAGACATCCAAGGTTTAGGAGCAAGTTGCCTTCAGTAGCAAGTAATTTCTTCAAAAGACTACCAGCTAGAACAGATAGTTTACTGTGA 3528 0.4527 MKLVVEVINAHDLMPKDGEGSASPFVEVDFENQLSRTRTVPKNLNPTWNQKLIFHLDATKPYHRQTIEVSVYNERRLTPGRNFLGRVRIPCSNIVKEGEEVYQIFPLENKWFLSPVKGEIGLKIYIASESNSKPKPLSPVFPSELEKLPPSTPLQAPESTTSTTLPPPRIIPSDSTTSEAGSIEELPTFDTPKSSIEEAEVYSGAQVRSSGVIDPEPKEESREAVPETTQQLDKHQVLQPQMISIKRRPPGTPSAMHSVDPQVQSSHHENYNHNDTNPQPRISIKRRPQAQGSAFTMHSVDPQVQPSYVEGYNHNDTNQKPRISIKRRPRGPGTPSPMRSFDPQVHASHDEAYNLMGTNPQQPRILVERPQNTPLTTHQVSPQVPTGLDENYNLSDTNARLGERWPSGGAYGRRGWMSGSDRFTSTFDLVEQMYYLYVRVVKAKDLPASTITSSCDPYVEVKLGNYKGRTKHFDHKLNPEWNQVFAFSKDRIQSSVLEVFVKDKATVGRDDYLGRVVFDLNEVPTRVPPDSPLAPQWYRLEDWREEGKVRGDIMLAVWMGTQADEAFSDAWHSDAATVYGEGVFNIRSKVYMSPKLWYLRVNVIEAQDVIPGDRNRLPEVFVKAQVGRQVLTTKICPTRTTTPFWNEDLVFVACEPFEEQLTITVEDRVHPSKDEVLGKISLPMTLFEKRLDQRPVHSRWFSLEKFGFGMLEGDRRNELKFSSRIHMRVCLEGGYHVLDESTLYSSDQRPTARQLWKQPIGILEVGILGAQGLLPMKMRDGRGSTDAYCVAKYGQKWVRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGEKAIGDSNAARDSRIGKVRIRLSTLEANRIYTNSHPLLVLHPHGVKKMGELQLAVRFTALSLANMVHIYGQPLLPKIHYLHPFTVNQIDNLRYQAMNIVAARLGRAEPPLRKEVVEYMLDVDSHLWSMRRSKANFFRIMSLFSGMITMGKWFSDVCLWKNHVTSILVHILFLILIWYPELILPTVFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSQDVVRMRYDRLRTVAGRIQTVVGDIATQGERFQSLLSWRDPRASSIFVVFSFCAAVTLYATPFRVVALVTGLYFLRHPRFRSKLPSVASNFFKRLPARTDSLL 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02258 1175 Gene3D C2 domain 430 577 IPR035892 -
Phco9g02258 1175 Gene3D C2 domain 1 139 IPR035892 -
Phco9g02258 1175 SMART C2_3c 2 103 IPR000008 -
Phco9g02258 1175 SMART C2_3c 762 872 IPR000008 -
Phco9g02258 1175 SMART C2_3c 435 532 IPR000008 -
Phco9g02258 1175 SMART C2_3c 598 698 IPR000008 -
Phco9g02258 1175 MobiDBLite consensus disorder prediction 131 294 - -
Phco9g02258 1175 MobiDBLite consensus disorder prediction 213 229 - -
Phco9g02258 1175 CDD C2A_MCTP_PRT_plant 2 128 - -
Phco9g02258 1175 Gene3D C2 domain 585 729 IPR035892 -
Phco9g02258 1175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 597 752 IPR035892 -
Phco9g02258 1175 FunFam C2 domain-containing protein 430 576 - -
Phco9g02258 1175 ProSiteProfiles C2 domain profile. 744 873 IPR000008 -
Phco9g02258 1175 MobiDBLite consensus disorder prediction 257 294 - -
Phco9g02258 1175 FunFam C2 domain-containing protein 584 731 - -
Phco9g02258 1175 ProSiteProfiles C2 domain profile. 580 701 IPR000008 -
Phco9g02258 1175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 761 897 IPR035892 -
Phco9g02258 1175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 434 574 IPR035892 -
Phco9g02258 1175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 128 IPR035892 -
Phco9g02258 1175 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1175 IPR047259 -
Phco9g02258 1175 MobiDBLite consensus disorder prediction 153 184 - -
Phco9g02258 1175 Pfam C2 domain 597 703 IPR000008 -
Phco9g02258 1175 Pfam C2 domain 2 106 IPR000008 -
Phco9g02258 1175 Pfam C2 domain 435 538 IPR000008 -
Phco9g02258 1175 Pfam C2 domain 761 875 IPR000008 -
Phco9g02258 1175 CDD C2B_MCTP_PRT_plant 435 561 IPR047257 -
Phco9g02258 1175 FunFam C2 domain-containing protein 744 899 - -
Phco9g02258 1175 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Phco9g02258 1175 MobiDBLite consensus disorder prediction 306 340 - -
Phco9g02258 1175 CDD C2D_MCTP_PRT_plant 762 892 IPR047255 -
Phco9g02258 1175 CDD C2C_MCTP_PRT_plant 598 750 IPR047258 -
Phco9g02258 1175 ProSiteProfiles C2 domain profile. 417 538 IPR000008 -
Phco9g02258 1175 Gene3D C2 domain 736 896 IPR035892 -
Phco9g02258 1175 Pfam Plant phosphoribosyltransferase C-terminal 1020 1175 IPR013583 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02258 Phco-Chr9 47846246 47849773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02258 9 47846246 47849773 Phco9g02258 9 47846246 47849773 ECH