Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02217 ATGGGGAAGATAGAAAAAAAAATAAAGACAATGACACAAGCTTTTCTATCACCCTTCAGGTCATCTTTGATGGCTATCCTCCTGGTCATCATCATTCTCTTGTCCTACTCCTCTCCTTCATTAGGCCTTCCTCCCTCAGAATCCTTCCAACCAAGAGACAATTTCCTCATTGATTGTGGAGCAGATGTTGCATCCACCCTCCCTGATGGAAGACAATTCAAAACAGACCCTCAAGCAAGTTCTTTCTTGAATGCCAATGATGAGTTCAAAATCAATGCACAAGATATCAAATTATCTTATCCTGTATACAAGAGTGCAAGGATCTTCATCCAGGAAGCAAAATACTCCTTCCATTTGGTTCAGCCAGGTTATCACTGGGTTCGTCTTCATTTCTACCCCATCAAGAACAACATCTTTGATCTCCAGAAGGCCACTTTCTCTATCTTCACAGATGCCTATGTGCTCCTCCACAGTTTCAATGTTAACAACACTGACAAGCCAATCCTCAAGGAGTACCTCATCAATGCAACTGAGCCTCAATTCTCCATTTCCTTCATTCCCTTGAAGAACTCAGCTGCATTCATCAATGCCATTGAGGTTGTTTCAGCTCCTGATGAACTCGTCTCGGACACGGCCACCGACCTTTTCCCTGTTGGCGAGTTCGCAGGCATCACGGCCTATGGCTTGCAGCCTGTTTTCAGGGTCAACAATGGAGGGCCTCTCATCACCTCATCAAATGATACCCTTGGGAGAACTTGGGAATCTGATCAGCCTTTCCTCACAAACAAGAATTTGGCCAAGAGTGCCTCGGTGGCTACCACTGCGGTTAAATTCCCCCAAAACAATCCTGCTATCTCCCCTCTCACTGCTCCACAAACTGTGTATGCTTCTGCCACTGAGATGGCTGATGCTGGTGTTAATCAGCCAAACTTCAATGTCTCGTGGAAATTTGATGTGGACACTTCTTTTTGCTACCTTGTTAGGCTGCACTTCTGTGACATTGTTAGCAAAGGGCTCAATCAACTCTACTTCAATGTGTATGTTAATGGGAAAACGGCAATCTCTAACTTTGATTTATCAGCCGTCACGGGTGCCTTGTCAACCCCCTATTTCAAAGACATTGTTGTCAATGCAACACTGATGGGCGAGGGACTATCAATTCAGGTTGGTCCAGCCACTGGTGTTGGTGGAAGTGCCAATGCCATTGTGAATGGTATAGAGGTCATGAAGATGAGCAACTCTGTGAATAGTTTGGATGGAGAATTTGGGGTTGATGGAAGAAGTATTAGTGGTTCTAACCGAGGCACAGTGGCTGCAGTTGGATTTGCCATGATGTTTGGAGCCTTTGTTGGCCTCGGAGCCATGGTGATCAAGTGGCACAAGAGGCCTCAAGACTGGCAAAAGAGGAACAGCTTCTCTTCATGGTTGCTGCCTCTGCATGCTGGTGACACAAGCTTCATGAGCAGCAAGAACTCAATGGGAAAGAGCAACTTCTTCTCCTCATCAATGGGACTAGGCCGGTACTTCTCCTTCGCTGAACTTCAGGAGGCAACCAAGAACTTTGACTCAAAGAACATCATTGGTGTTGGTGGATTTGGCAATGTGTATTTGGGTGTGATAGATGAGGGGACTCAAGTGGCAGTCAAGAGAGGAAACCCTCAATCAGAGCAAGGCATCAACGAATTCCAGACTGAAATCCAAATGTTGTCCAAGCTCAGGCACAGGCACTTGGTGTCCTTGATTGGATACTGTGATGAGAATGATGAGATGATACTGGTTTATGAGTACATGCCCAGTGGACACTTCAGAGACCATCTTTATGGAAAGAACATGCCTCCTCTCTCATGGAAGCAAAGGCTAGAGATCTGCATTGGTTCAGCTCGTGGTCTTCACTACCTTCACACAGGCACAGCTCAAGGCATCATTCACCGTGATGTCAAGACCACCAACATCTTGCTTGATGAGAATTTGACAGCCAAGGTTTCTGATTTTGGACTTTCCAAGGATGCACCAATGGGGCAGGGTCATGTTAGCACTGCAGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAACTGACAGAAAAATCTGATGTATACTCATTTGGGGTGGTTCTGCTTGAGGCCCTCTGTGCAAGGCCAGCCATCAACCCTCAGTTGCCCCGTGAACAAGTAAACTTGGCCGATTGGGCGATGCAGTGGAAGAGAAAGGGCTTGCTTGACAAGATCATAGACCCTCACCTCATTGGATCCATCAATCCTGAATCTATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGATCATGGAGTGGATAGGCCTTCAATGGGAGATGTTTTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGGAAAGGCTGAGGATGAGACAAAGTCATCTGCAGCTGCCCCTACTTCACCACATGTCCCACCAGCTTCTTCCACTCCTTCTGATGACCCTCCGGCTCCGGCTGCAGCTCCGGCTGCTCCACAGCCTGCTGCTGCAGTAGTGGCGCCACGTGCTGAAGTGAATAATGCTACACCAGAAATGAATTCTATTGATGACCATTCTGGAACTGCAATGTTTGCTCAGTTTAGCAATCTCAATGGCAGGTGA 2652 0.4691 MGKIEKKIKTMTQAFLSPFRSSLMAILLVIIILLSYSSPSLGLPPSESFQPRDNFLIDCGADVASTLPDGRQFKTDPQASSFLNANDEFKINAQDIKLSYPVYKSARIFIQEAKYSFHLVQPGYHWVRLHFYPIKNNIFDLQKATFSIFTDAYVLLHSFNVNNTDKPILKEYLINATEPQFSISFIPLKNSAAFINAIEVVSAPDELVSDTATDLFPVGEFAGITAYGLQPVFRVNNGGPLITSSNDTLGRTWESDQPFLTNKNLAKSASVATTAVKFPQNNPAISPLTAPQTVYASATEMADAGVNQPNFNVSWKFDVDTSFCYLVRLHFCDIVSKGLNQLYFNVYVNGKTAISNFDLSAVTGALSTPYFKDIVVNATLMGEGLSIQVGPATGVGGSANAIVNGIEVMKMSNSVNSLDGEFGVDGRSISGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSMGKSNFFSSSMGLGRYFSFAELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPSGHFRDHLYGKNMPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENLTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPHLIGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDETKSSAAAPTSPHVPPASSTPSDDPPAPAAAPAAPQPAAAVVAPRAEVNNATPEMNSIDDHSGTAMFAQFSNLNGR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02217 883 FunFam Receptor-like protein kinase FERONIA 228 413 - -
Phco9g02217 883 MobiDBLite consensus disorder prediction 821 840 - -
Phco9g02217 883 Pfam Malectin-like domain 57 411 IPR024788 -
Phco9g02217 883 FunFam Receptor-like protein kinase FERONIA 597 811 - -
Phco9g02217 883 Pfam Protein tyrosine and serine/threonine kinase 524 783 IPR001245 GO:0004672|GO:0006468
Phco9g02217 883 PANTHER OS07G0166700 PROTEIN 507 797 IPR045272 GO:0004714|GO:0006468
Phco9g02217 883 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Phco9g02217 883 FunFam Putative receptor-like protein kinase 54 204 - -
Phco9g02217 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Phco9g02217 883 SUPERFAMILY Protein kinase-like (PK-like) 504 788 IPR011009 -
Phco9g02217 883 FunFam receptor-like protein kinase FERONIA 484 596 - -
Phco9g02217 883 Gene3D Transferase(Phosphotransferase) domain 1 597 817 - -
Phco9g02217 883 CDD STKc_IRAK 527 791 - -
Phco9g02217 883 MobiDBLite consensus disorder prediction 801 869 - -
Phco9g02217 883 Gene3D Phosphorylase Kinase; domain 1 483 596 - -
Phco9g02217 883 ProSiteProfiles Protein kinase domain profile. 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02217 883 MobiDBLite consensus disorder prediction 806 820 - -
Phco9g02217 883 Gene3D - 230 413 - -
Phco9g02217 883 Gene3D - 54 204 - -
Phco9g02217 883 SMART serkin_6 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02217 Phco-Chr9 47537337 47539988 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco9g02217 Malectin_like 2.8e-37 CL0202