Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02115 ATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTACGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGAGTTTATCAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAGGGAGAAAATCGTGCTCTAGTTTATGAATACATGCCAAATGGTTCATTGGATAAATACATCTTCTCCAAAAAGGAAAGTATCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGAATTGCTTATCCTCATCAAGGCTGTGATGTGCAAATTCTACATTTTGACATTAAGCCTCATAATATTCTTCTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCAAAGATACGTCTGTTGCTTTAACTATGGCTAGAGGAACTTCAGGTTATATGGCTCCAGAATTATTCTACAATAATATTGGTGGAGTATCCAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAATACTTCCCCTTTTGGATATATGATCAAATGAAAGATGAAAAAGATACGGACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAGTTGCGCTTTGGTGTATACAATTGAAACCAAATGACCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAACAGTTGGACATGATTGCGGAGACAACTCATACCAAACATCTAAGTAG 882 0.3696 MSRGYKVKLGEGGYGSVYKGKLRSGSEVAIKMLKKSKADGQEFINEVASIGRIHHVNVVHLIGYCAEGENRALVYEYMPNGSLDKYIFSKKESIPLSYEKTYEISLGIARGIAYPHQGCDVQILHFDIKPHNILLDDDFIPKVSDFGLAKLYPVKDTSVALTMARGTSGYMAPELFYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQMKDEKDTDIEDASEEDKILVKKMYVVALWCIQLKPNDRPSMKRVVEMLEEKVETVGHDCGDNSYQTSK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02115 293 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 277 IPR045874 GO:0004672
Phco9g02115 293 PIRSF ILK 4 287 - -
Phco9g02115 293 Gene3D Phosphorylase Kinase; domain 1 9 78 - -
Phco9g02115 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Phco9g02115 293 Pfam Protein kinase domain 7 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02115 293 FunFam serine/threonine-protein kinase PBS1-like 1 77 - -
Phco9g02115 293 SUPERFAMILY Protein kinase-like (PK-like) 8 274 IPR011009 -
Phco9g02115 293 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Phco9g02115 293 ProSiteProfiles Protein kinase domain profile. 3 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02115 293 Gene3D Transferase(Phosphotransferase) domain 1 79 288 - -
Phco9g02115 293 SMART serkin_6 5 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02115 293 FunFam PR5-like receptor kinase 78 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02115 Phco-Chr9 46414950 46415831 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco9g02115 Pkinase 3.3e-48 CL0016