Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02114 ATGGTGGTCTTATCTTCTTTCTGCTGCTCTACACAATCACTGCTTGCCGCTGTGGCTATCATTATTGAGCTCTTCCGGCAAATTCACGGTGCCAAGGATCGTCCATTCTGTGCTCCTTCTTCCTGTGGCAAAATTGGCAACATAACTTTTCCTTTCCGACTCAAAGGCGACCCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTCTTCACTTTGTTTTCAGGGAAATACCATGTTCAGAATATCAACTACCAAACATACAGCATCCAATTGACTGATGCAGGTCTTGAGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATCTCTTTAAGTAACTTCACTTACATTGGTGGTCCTAGATATTACGCCACTGATCCACTAACTTTCTGGAATGGGAATGAGACTCCTGATAGGCCTCCCTATGTAGCGTTTCTAAACTGTAGTGATCCAGTGACTGATGATCCTCGATACGTGAAAGTGAATGGCAGACTTTGTGATTCTGGAGGCCATGTCTATGCTGTTCTTTCTTCTTCTGGTGAATTCACAATGATGGACATCAAGGTTGGGTGCCATTTAAAGGCTGCTACCCTTACAAACGATAACCATTGCAACAACGTTTCCTATGATCATATCCATGAGTGCCTGCATAATGGGTTTTGGTTGTATACGGTGACACCAGTTATTTGTATAGACCAATGTAGAAAGGGTGTGAGATGCCTCATCAATCAAACCACTCATGAAATTGGATGTGAACAAAACTCCTGCTATGTTTTGGGCATAGAATTTAAAACCAAGTGCGGTTATGTTGAAATCTTGGTAATGGGACTAATCTATAGAATAACACGTTCACACCACTTTTCAAAATGGCAAGAGGAAGAAGATTTGATTTTATTAGCCCTTGTTCCAATATTTGTGGCTGCAAGATTTCTATTTGGAGTGGCACTTTTGCTTGCAGTATTTATCCATATGTGGCGACGTAGGCATTGCTCAATGTATGAAAACATTGAAACTTTTTTGCTACACAACAATCTAAATCCTATCAGGTACGGATACAGAGAAATTAAGAAAATGAGTAGAGGTTTCAAAGTTAAATTGGGTGAAGGAGGTTACGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGAGTTTATTAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGAGTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCCAAAGAGGAAAGTATCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGAATTGCTTATCTTCATCAAGGCTGTGATGTGCAAATTTTACATTTTGATATTAAGCCTCATAATATCCTTCTAGATGCTGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCGAAGATACATCAGTTGCTTTAACTATGGCAAGAGGAACTTTAGGTTACATGGCTCCAGAACTATTCTACAATAATATTGGCGGAGTATCTAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATGATCAAATGAAAGATGAAAAAGATACTGACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAGTTGCGCTTTGGTGTATACAATTGAAACCAAATGACCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAGTTGAACATGATTGTAGAGACTACTCAAACCAAACATCATGGAGTGGTTCAACTATTTCTAGCGAAAATCTTGGCAAACCAACACTAATCATCCATGGGAGAGAAACCCTTGACGAACAAGAAAATTGCTCAGAGCTAAATGTTGGTCGTCCTTAA 2127 0.3945 MVVLSSFCCSTQSLLAAVAIIIELFRQIHGAKDRPFCAPSSCGKIGNITFPFRLKGDPPGCGLPRYELDCVKNVTVFTLFSGKYHVQNINYQTYSIQLTDAGLEEDTACSIPRYFISLSNFTYIGGPRYYATDPLTFWNGNETPDRPPYVAFLNCSDPVTDDPRYVKVNGRLCDSGGHVYAVLSSSGEFTMMDIKVGCHLKAATLTNDNHCNNVSYDHIHECLHNGFWLYTVTPVICIDQCRKGVRCLINQTTHEIGCEQNSCYVLGIEFKTKCGYVEILVMGLIYRITRSHHFSKWQEEEDLILLALVPIFVAARFLFGVALLLAVFIHMWRRRHCSMYENIETFLLHNNLNPIRYGYREIKKMSRGFKVKLGEGGYGSVYKGKLRSGSEVAIKMLKKSKADGQEFINEVASIGRIHHVNVVHLIGYCAEGQKRALVYEYMPNGSLDKYIFSKEESIPLSYEKTYEISLGIARGIAYLHQGCDVQILHFDIKPHNILLDADFIPKVSDFGLAKLYPVEDTSVALTMARGTLGYMAPELFYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQMKDEKDTDIEDASEEDKILVKKMYVVALWCIQLKPNDRPSMKRVVEMLEEKVESLEMPPKPVYYPHETVEHDCRDYSNQTSWSGSTISSENLGKPTLIIHGRETLDEQENCSELNVGRP 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02114 708 CDD STKc_IRAK 373 639 - -
Phco9g02114 708 Gene3D Transferase(Phosphotransferase) domain 1 442 647 - -
Phco9g02114 708 SUPERFAMILY Protein kinase-like (PK-like) 357 638 IPR011009 -
Phco9g02114 708 Gene3D Phosphorylase Kinase; domain 1 344 441 - -
Phco9g02114 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Phco9g02114 708 PANTHER RUST RESISTANCE KINASE LR10-RELATED 333 658 IPR045874 GO:0004672
Phco9g02114 708 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Phco9g02114 708 SMART serkin_6 367 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02114 708 FunFam serine/threonine-protein kinase PBS1-like 338 441 - -
Phco9g02114 708 Pfam Protein kinase domain 371 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02114 708 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Phco9g02114 708 ProSiteProfiles Protein kinase domain profile. 367 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02114 708 FunFam PR5-like receptor kinase 442 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02114 Phco-Chr9 46395640 46398605 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco9g02114 Pkinase 4.9e-48 CL0016