Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02112 ATGATGGGATTGAGTCAAGAGGTAAACAATGGTGGTCTATCTTCTTTCTGCTGCTCTGCACAATCACTGCTTGCCCGTGTGGCTATCATTATTGTACTATTCCGGCAAATTCACGGTGCCAAGGATCGTCCATTGTGTGCTCCTTCTTCCTGTGGCAAAATTGGCAACATAAGTTATCCTTTCCGACTGAAAGGCGACCCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGCCTTCACTTTGTTTTCAGGGAAATACCATGTTCACAATATCAACTACCAAACATACAGCATCCAATTGACTGATGCAGGTCTTGAGGAGGACACTGCTTGCTTCATTCCTCGCTATTTCATCTCTTTAAGGAACTTCACTGACTTTGTCAGTGATGATCCTCGATACGTGGAAGTGAATGGCAGACTTTGTGATTTTGGAGGCCATGTCTATGCTGTTCTTGGTTCTGGTGAACTCACAGTGATGGACATCAAGGTTGGCTGCCATTTAAAGGCTGCTACCTTTACAAGCAATAGCCATTGCAACAACGTTTCCTATGATCATATCCATGAGTGCCTGCATAATGGGTTTTGGTTGTATTGGGTGATACCAGTTATTTGTATAGACCAATGTGGAAAGGGTGTGAGATGCCTCAATCAGACCACTCGTCAAATTGAATGTCAACGAGATTACTGCCATGTTTTGAGCCACTGCGGTTATGTTGTATTCTTCATAATGGGCTATATTCCAATATTTGTGGCTGCAAGATTTCTATTTGGAGTGCCACTTTTGCTTGCACTATTTATTCTTAAGTGGCAACGTAGGCATTACTCAATGTATGAAAACATTGAAACTTTTTTGCTACACAACAATCTAAATCCTATTAGGTACGGATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTTCGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCAAAAGCTGATGGACAAGAGTTTATGAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTATATCTCATTGGATATTGTGCTGAAGGACAAAAGCATGCTCTAGTTTATGACTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCTAAAGAGGAAAGTATCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCCTCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCGTAATATTCTTCTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCAAAGATACGTCAATTGCTTTAACTATGGCTAGAGGAACTTTAGGTTACATGGCTCCAGAACTACTCTACAATAATATTGGTGGAGTATCCAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGAAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATAATCAAATTAAAGATGAAACAAATACTCACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTCGTTGCACTTTGGTGTATACAATTGATGTAA 1704 0.3926 MMGLSQEVNNGGLSSFCCSAQSLLARVAIIIVLFRQIHGAKDRPLCAPSSCGKIGNISYPFRLKGDPPGCGLPRYELDCVKNVTAFTLFSGKYHVHNINYQTYSIQLTDAGLEEDTACFIPRYFISLRNFTDFVSDDPRYVEVNGRLCDFGGHVYAVLGSGELTVMDIKVGCHLKAATFTSNSHCNNVSYDHIHECLHNGFWLYWVIPVICIDQCGKGVRCLNQTTRQIECQRDYCHVLSHCGYVVFFIMGYIPIFVAARFLFGVPLLLALFILKWQRRHYSMYENIETFLLHNNLNPIRYGYREIKKMSRGYKVKLGEGGFGSVYKGKLRSGSEVAIKMLKKSKADGQEFMNEVASIGRIHHVNVVYLIGYCAEGQKHALVYDYMPNGSLDKYIFSKEESIPLSYEKTYEISLGIARGIAYPHQGCDVQILHFDIKPRNILLDDDFIPKVSDFGLAKLYPVKDTSIALTMARGTLGYMAPELLYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYNQIKDETNTHIEDASEEDKILVKKMYVVALWCIQLM 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02112 567 ProSiteProfiles Protein kinase domain profile. 311 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02112 567 PANTHER RUST RESISTANCE KINASE LR10-RELATED 284 566 IPR045874 GO:0004672
Phco9g02112 567 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Phco9g02112 567 Gene3D Transferase(Phosphotransferase) domain 1 386 567 - -
Phco9g02112 567 SUPERFAMILY Protein kinase-like (PK-like) 299 565 IPR011009 -
Phco9g02112 567 FunFam Os07g0541700 protein 386 475 - -
Phco9g02112 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Phco9g02112 567 SMART serkin_6 313 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02112 567 Pfam Wall-associated receptor kinase galacturonan-binding 46 109 IPR025287 GO:0030247
Phco9g02112 567 Gene3D Phosphorylase Kinase; domain 1 288 385 - -
Phco9g02112 567 Pfam Protein kinase domain 315 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02112 567 FunFam serine/threonine-protein kinase PBS1-like 281 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02112 Phco-Chr9 46371552 46374569 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco9g02112 Pkinase 3.1e-44 CL0016