Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02109 ATGGCTCGTCAACAACCAATAGATGTTGAGTCTTTCCACGGCGCTGTCATTGACAAGCTATCCTGTCCACTTACACGACCAGAGTTAAACAATGGTGGTCTTATCTTCTTTCTGCTGCTCTGCACAATCACTGCTTGCCCGTGTGGTTATCATTGTTCTGCTATTCCGGCAAATTCACGCTGCCAAGGATCGTCCCTTCTGTGCTCCTTCTTCCTGTGGCAAAATTGGCAACATAACTTATCCTTTCCGACTCAAAGGAGATCCACCTGGTTGTGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTGTTCACTTTGTTTTCAGGGAAATACCATGTTCAGAATATCAATACCAAACATACAGCATCCAATTGACTGATGCAGGTGTTGAGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATCTCTTTAAGTAACTTCACTTACATTGTTGTTCCTAGATATTACGCCACTGATCCACTAACTTTCTGGAATGGGAATGATACTCCTGATAGGCCTCCCTATGTAGCGTTTCTAAACTGTAGTGATCCAGTGACTGATGATCCTCGATACGTGGAAGTGAATGACAGACTTTGTGATTCTGGAGGCCATGTCTATGCTGTTCTTTCTTCTTCTGGTGAATTCACAATGATGGACATCAAGGTTGGCTGCCATTTAAAGGCTGCTACCTTTACAAACAATAACCATTGCAACAACGTTTCCTATACTCATATCCGTGACTGCCTGCATAATGGGTTTTGGTTGTATTGGGTGTATCCAGTTATTTGTACAGACCAATGTGGAAAGGGTGTGAGATGCCTCATCAATCAAACCACTCATCAAATTGGATGTCAACCAGATAATTATTGCCTAGTTTTGGGCGAAGAATTTGAAAAGAACCAGTGCGGAATTCCAAACCGGATTCTATTATATATAGCTGTAATTCTATACTATATTGCACGCTATGTTGAATTCTTCATAATGGGACTGATCTATAGAATAACGCATTCACATCACTTTTCGGAATGGCTAGTGGAAGGAGATTTGGTTTTATTAGCCCCTATTCCAATATTTATGGCTGCAAGATTTCTATTTGGAGTGGCACTTTTGCTTGCACTATTTATCCATAGGTGGCGACGTAGGCATTACTCAATGTATGAAAACATTGAAACATTTTTGCTACACAACAATCTAAATCCTATTAGGTACGGATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTACGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCAAAAGCAGATGGACAAGAGTTTATTAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGACTACATGTCAAATGGTTCATTGGATAAATACATCTTCTCCAAAGAGGAAAGCATCCCTTTAAGTTATGAAAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTTCATCAAGGCTGCGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTTTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATTTCCTGTCGAAGATACGTCGATTGCTTTAACTATGGCCAGAGGAACTTTAGGTTACATGGCTCCAGAACTATTCTACAATAATATTGGTGGAGTATCCAATAAGGCGGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTTCCCTTTTGGATATATGATCAAATTAAAGATGAAAAAGATACTCACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAATATGTATGTAGTTGCACTTTGGTGCATACAATTGAAACCAAATGACCGTCCTTCAATGAAAAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAGTTGGACATGATTGTGGAGACAACTCAAACCAAACATCATGGAGTGGTTCAACTAGTTCTAGCCAAAATGTTGGAAAAACCAACACTAACATCCATGGGAGAGCAACGCTTTGA 2235 0.3937 MARQQPIDVESFHGAVIDKLSCPLTRPELNNGGLIFFLLLCTITACPCGYHCSAIPANSRCQGSSLLCSFFLWQNWQHNLSFPTQRRSTWLWPPKVRIRLRKECDSVHFVFREIPCSEYQYQTYSIQLTDAGVEEDTACSIPRYFISLSNFTYIVVPRYYATDPLTFWNGNDTPDRPPYVAFLNCSDPVTDDPRYVEVNDRLCDSGGHVYAVLSSSGEFTMMDIKVGCHLKAATFTNNNHCNNVSYTHIRDCLHNGFWLYWVYPVICTDQCGKGVRCLINQTTHQIGCQPDNYCLVLGEEFEKNQCGIPNRILLYIAVILYYIARYVEFFIMGLIYRITHSHHFSEWLVEGDLVLLAPIPIFMAARFLFGVALLLALFIHRWRRRHYSMYENIETFLLHNNLNPIRYGYREIKKMSRGYKVKLGEGGYGSVYKGKLRSGSEVAIKMLKKSKADGQEFINEVASIGRIHHVNVVHLIGYCAEGQKRALVYDYMSNGSLDKYIFSKEESIPLSYEKTYEISLGIARGIAYLHQGCDVQILHFDIKPHNILLDDDFIPKVSDFGLAKLFPVEDTSIALTMARGTLGYMAPELFYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQIKDEKDTHIEDASEEDKILVKNMYVVALWCIQLKPNDRPSMKRVVEMLEEKVESLEMPPKPVYYPHETVGHDCGDNSNQTSWSGSTSSSQNVGKTNTNIHGRATL 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02109 744 SUPERFAMILY Protein kinase-like (PK-like) 406 688 IPR011009 -
Phco9g02109 744 Gene3D Transferase(Phosphotransferase) domain 1 492 697 - -
Phco9g02109 744 MobiDBLite consensus disorder prediction 711 744 - -
Phco9g02109 744 Gene3D Phosphorylase Kinase; domain 1 394 491 - -
Phco9g02109 744 FunFam PR5-like receptor kinase 492 699 - -
Phco9g02109 744 PANTHER RUST RESISTANCE KINASE LR10-RELATED 390 712 IPR045874 GO:0004672
Phco9g02109 744 ProSitePatterns Protein kinases ATP-binding region signature. 423 445 IPR017441 GO:0005524
Phco9g02109 744 CDD STKc_IRAK 423 689 - -
Phco9g02109 744 Pfam Protein kinase domain 421 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02109 744 ProSiteProfiles Protein kinase domain profile. 417 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02109 744 MobiDBLite consensus disorder prediction 705 744 - -
Phco9g02109 744 FunFam serine/threonine-protein kinase PBS1-like 387 491 - -
Phco9g02109 744 SMART serkin_6 419 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02109 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02109 Phco-Chr9 46304352 46308025 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco9g02109 Pkinase 1.9e-47 CL0016