Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02086 ATGGGGATGAAAACAAAAAGAATCATGATCCCTATTAGGGTTGTTCTTAGCTTCATGCTCCTCCTTTTCATCACAGCAAATGCTCAAGCTGCAATTTACATGAACAGTTTTTGTGAGAACTCAACTCTTGTTAGCCCTTCATACAAAGCCAACGTTGACACCTTCCTCTCATGGGTAACCACAGACTCATACAACGGCGATGGATACAACTACACCACTGTAAATATCAACAACCACAACAATCATGATGATGCTGTTTATGGATTGTACAGCTGCAGATACGACATCACAGGGTATTTTTGCCAGTTCTGCATCACCACTGCTTCAAAGGAACTCTCTCAAAGGTGTCCCAACACTGTAAGAGGTATCATATGGTATGATGTATGCATCATCCGTTACTCAGACCAAAATTTCATTGGCAAAGTTAGTTTAACCCCAGTATGGAACACTACCGGAACCAGAAAAATCAAGGACTCATCAGAAGTTAAGAAAGCTGAGGATTCTATGGAGAGTTTGATTAGAAAAGCGACTGTAGAGAGCAAGACATTTTGGGCAGTGGATGAGTTTGAATGGACTGACAATGAGAAAAGATATGGTTGGGTGCAGTGTGATAGAGCTATTGAAAATGATGAGTGTGGTGAGTGCTTGCATGCAACGTTAGACATATTTCCAGAGTGTTGTTCCACAAATGTACAGTGGGCAATTTTTGGTCCAAGCTGTAGCATCAGGATGGATGATCAAAATCTCTACCAGAGTTCAGGCAACGGAGGTACTAGTAGTAAGTCAAGAAAGTTGATAATTTCCTTTAGTGTGTTCGGTGCTGTAGCTCTAATATGTTTCAGTATCTACTGCTTCTGGTACAGGAAAAGAGTCAGAAAAGATAAGATGATGCTTGATGAGGAAAAATTGAATGGAGATCTGCCTACACTCCCGTTAATCGCAGTTCTACATAGTACCAATAACTTTTCAGAAGCATTTAAATTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTCAAAAGGCTCTCAAAATTTTCTGGTCAGGGCTCACAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAGTTGCAGCATCGTAACCTTGTGAGACTTTTGGGGTGCTGCTTGGAGGAAAATGAGAAGATACTAGTATATGAGTATATGTGTAATGCAAGCCTCGACTTTCACCTCTTTGGTGATGATGAGAAGAGAAAGCAACTTGATTGGAGACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTATTTTATATCTTCATGAGGACTCTCGACTCAAAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACGATGAGATGAATCCCAAGATCTCAGATTTTGGATTGGCCAGGGCATTTGAAATAGGACAGAACCAAGCCAATACCAAACGAGTAGTGGGAACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCTGTGAAATCAGATGTTTTTAGCTTTGGAGTTCTTGTCCTAGAAATCATTTGTGGAAGGAAGAACAGTGGATTCCATCGAGCAGAACATGGTCAAAGTCTTCTTTTATATGCTTGGAGCATATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAATACTGATAAAATCCTTCATAGCCAGTGAGGTTGTCAAGTGCTTACACATTGGTTTGCTGTGTGTTCAACAAGATGCAGCAGATAGACCAACCATGTCTACGGTTGTTCTAATGCTAGGTAGTGAATCAATGGCCCTTCCAAAACCCAATCACCCTGCATTTTCTGTTGGAAAATTGACCTCTAAAGAAGCATCAGCTTCAAGAAGTTTCAAGAATCTTTCTATTAATGATGTAACAGTCTCGACTGATTTAGCAAGAACACAAATATTCATGATCCTTATTAGGGTTAGTGTTAGCTTCTTGTTCCTCCTTTTCACCACAACAAGAGCTCAAGCACCAATTTACATGTACAATTTTTGTGAGAACTCAACTTCTGTTAGCCCTTCATACAAGGCCAACGTTGACTCCCTCCTCTCATGGGTAACCACAGACTCAGACCAAAGTGATGGATACAACTACACCACTGTAAACAACAACAACAACCACAACAATGATGATGCTGTTTATGGATTGTACAGCTGCAGATACGACATCACAGGGTATTTTTGCCGGTTCTGCATCACCACTGCTGCCAGTGAACTCTCTCGGAGGTGTCCCGACACTGTAAGAGCTATCATATGGTATGATATATGCATCATCCGTTACTCAAACCAGAGTTTCAGTGGCAAAGTTAGTTTAACCCCAATATGGAATATTACAGGACCCAGAAAAATCAAGGATTCAGCAGAAGCTAAGAAAGCTGAGGATTCTATGGAGGGTTTGATTACAAAAGCAACTATAGAGACCAAGAAGTTTTGGGCAGTGGATGAGTTTGATTGGGTTGACAATGAGAAAAGATATGGTTGGGTGCAGTGTGACAGGGATATTCCAAGTGATGAGTGTGGTGAGTGTTTGCATGCATTGTTAGACATATTTCCACAGTGTTGTTCCACAAATGCACAGTGGGCAGTTTTTGGTCCAAGCTGTGGAATCAGGATGGATGATGAAAAGTTCTACCAAAGTTCAGGCAATGGAGGTACTAGTAAGTCAAGAAAGTTAATCATTTCCGCTAGTGTGTTGGGGTCTGTAGCTCTACTATGTTTCAGTGTCTACTGCTTCTGGTACAGGAAAAGAGTAAGAAAAGATAAGATGACGTTCGATGAGGAAAAATTGAATGGAGATCTGCCTACAATCCCATTAATCGCAGTTCTACATAGTACTAATAACTTTTCAGAAGAATCTATATTAGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTGAAAAGGCTCTCAAAATTTTCTGGTCAGGGCTCACAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGTAACCTTGTGAGACTTTTGGGGTGCTGCTTGGAGGAAAATGAGAAGATACTGGTATATGAGTATATGTGTAATGCAAGCCTCGACTTTCACCTCTTTGGTGATGATGAGAAGAGAAAGCAACTTGATTGGGGACTAAGATTCAGCATTATCAATGGAATAGCAAGAGGTATTTTATATCTTCATGAGGACTCTCGACTCAAAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACGATGAGATGAATCCCAAGATCTCAGATTTTGGATTGGCCAGGGCATTTGAAATAGGAGAGAACCAAGCCAAGACAAAACGAGTAGTGGGCACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCTGTGAAATCAGATGTTTTCAGCTTTGGAGTTCTTGTCCTAGAAATCATTTGTGGAAAAAAGAACAGTGGATTCCATCGATCAGAACATGGTCAAAGTCTTCTCTTATATGCTTGGAGAATATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAGCACTGATAAAATCCTTCATAGCTAGTGAGGTTGTCAAGTGCTTACACATTGGTTTGCTGTGTGTTCAACAAGATGCATCAGATAGACCAACCATGTCTACGGTTGTTCTAATGCTAGGAAGTGACACAATGACCCTTCCAAAACCCAATCACCCTGCATTTTCTGTTGGAAAATTGACTTCTAAAGAAGCATCAGCTTCAGGAAGTTCCAAGAATCGTTCTATTAATGATGTAACAGTCTCAGCCGTTTTGGCAAGATAA 3834 0.4035 MGMKTKRIMIPIRVVLSFMLLLFITANAQAAIYMNSFCENSTLVSPSYKANVDTFLSWVTTDSYNGDGYNYTTVNINNHNNHDDAVYGLYSCRYDITGYFCQFCITTASKELSQRCPNTVRGIIWYDVCIIRYSDQNFIGKVSLTPVWNTTGTRKIKDSSEVKKAEDSMESLIRKATVESKTFWAVDEFEWTDNEKRYGWVQCDRAIENDECGECLHATLDIFPECCSTNVQWAIFGPSCSIRMDDQNLYQSSGNGGTSSKSRKLIISFSVFGAVALICFSIYCFWYRKRVRKDKMMLDEEKLNGDLPTLPLIAVLHSTNNFSEAFKLGEGGFGPVYKGILPDGRQIAVKRLSKFSGQGSQEFKNEVMFIAKLQHRNLVRLLGCCLEENEKILVYEYMCNASLDFHLFGDDEKRKQLDWRLRLSIINGIARGILYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFEIGQNQANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNSGFHRAEHGQSLLLYAWSIWCAGKCLELMDPILIKSFIASEVVKCLHIGLLCVQQDAADRPTMSTVVLMLGSESMALPKPNHPAFSVGKLTSKEASASRSFKNLSINDVTVSTDLARTQIFMILIRVSVSFLFLLFTTTRAQAPIYMYNFCENSTSVSPSYKANVDSLLSWVTTDSDQSDGYNYTTVNNNNNHNNDDAVYGLYSCRYDITGYFCRFCITTAASELSRRCPDTVRAIIWYDICIIRYSNQSFSGKVSLTPIWNITGPRKIKDSAEAKKAEDSMEGLITKATIETKKFWAVDEFDWVDNEKRYGWVQCDRDIPSDECGECLHALLDIFPQCCSTNAQWAVFGPSCGIRMDDEKFYQSSGNGGTSKSRKLIISASVLGSVALLCFSVYCFWYRKRVRKDKMTFDEEKLNGDLPTIPLIAVLHSTNNFSEESILGEGGFGSVYKGILPDGRQIAVKRLSKFSGQGSQEFKNEVMFIAKLQHRNLVRLLGCCLEENEKILVYEYMCNASLDFHLFGDDEKRKQLDWGLRFSIINGIARGILYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFEIGENQAKTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFHRSEHGQSLLLYAWRIWCAGKCLELMDPALIKSFIASEVVKCLHIGLLCVQQDASDRPTMSTVVLMLGSDTMTLPKPNHPAFSVGKLTSKEASASGSSKNRSINDVTVSAVLAR 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02086 1277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Phco9g02086 1277 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Phco9g02086 1277 Gene3D - 668 775 IPR038408 -
Phco9g02086 1277 Gene3D - 789 886 IPR038408 -
Phco9g02086 1277 Gene3D - 30 138 IPR038408 -
Phco9g02086 1277 Gene3D - 145 248 IPR038408 -
Phco9g02086 1277 ProSiteProfiles Protein kinase domain profile. 958 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02086 1277 Pfam Protein tyrosine and serine/threonine kinase 327 538 IPR001245 GO:0004672|GO:0006468
Phco9g02086 1277 Pfam Protein tyrosine and serine/threonine kinase 961 1227 IPR001245 GO:0004672|GO:0006468
Phco9g02086 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 287 397 - -
Phco9g02086 1277 Pfam Domain of unknown function (DUF3403) 1232 1277 IPR021820 GO:0004674
Phco9g02086 1277 ProSitePatterns Protein kinases ATP-binding region signature. 964 986 IPR017441 GO:0005524
Phco9g02086 1277 CDD STKc_IRAK 328 594 - -
Phco9g02086 1277 FunFam cysteine-rich receptor-like protein kinase 10 398 601 - -
Phco9g02086 1277 CDD STKc_IRAK 964 1230 - -
Phco9g02086 1277 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Phco9g02086 1277 Gene3D Phosphorylase Kinase; domain 1 919 1033 - -
Phco9g02086 1277 Gene3D Phosphorylase Kinase; domain 1 284 397 - -
Phco9g02086 1277 ProSiteProfiles Gnk2-homologous domain profile. 781 886 IPR002902 -
Phco9g02086 1277 SUPERFAMILY Protein kinase-like (PK-like) 944 1230 IPR011009 -
Phco9g02086 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 923 1033 - -
Phco9g02086 1277 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 75 618 - -
Phco9g02086 1277 SUPERFAMILY Protein kinase-like (PK-like) 308 594 IPR011009 -
Phco9g02086 1277 Pfam Salt stress response/antifungal 45 135 IPR002902 -
Phco9g02086 1277 Pfam Salt stress response/antifungal 680 773 IPR002902 -
Phco9g02086 1277 Pfam Salt stress response/antifungal 163 246 IPR002902 -
Phco9g02086 1277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1080 1092 IPR008271 GO:0004672|GO:0006468
Phco9g02086 1277 ProSiteProfiles Gnk2-homologous domain profile. 667 775 IPR002902 -
Phco9g02086 1277 SMART serkin_6 958 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02086 1277 SMART serkin_6 322 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02086 1277 Gene3D Transferase(Phosphotransferase) domain 1 1034 1238 - -
Phco9g02086 1277 Gene3D Transferase(Phosphotransferase) domain 1 398 603 - -
Phco9g02086 1277 ProSiteProfiles Protein kinase domain profile. 322 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02086 1277 FunFam cysteine-rich receptor-like protein kinase 10 1034 1237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02086 Phco-Chr9 45988038 46002020 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g02086 PK_Tyr_Ser-Thr 5.9e-46 CL0016