Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02081 ATGGGAACACAACTAAATGTGAGATCAATGTGCTTTGGTTTCTTGTTATCTTTGAGTTTCAGTTGTTTCACTTATACACAGCAAACACCCATTTACCAGGGAAGTTACTGCCAAAACACCACCCAAGAATCTCTCACCACTGCATACCGAACCAATCTTGAGAGAATCCTCTCATGGATGTCCTCAGATGCAGCCACAAGCAAAGGTTATAACTACACCAGCATAGGAAACAACACCACTGTGTATGGCCTATACAATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTAATGCTGCCAGAGAAGTTCCTCAGCACTGCCCCAATAGGGTGTCTGCTATAGTGTGGTATGATTTCTGCATTCTGAGGTACTCAAATGAGAACTTCTTTGGGAAAATTCTTACATACCCAACATGGCATGCTGTTGGAACAAAAAACATTTCCAACAAGGAAGAGACTAAGAAAGGTGAGGATTTTATGAGAAGCTTGATCAGAAAAGCAACTGTGGAAACCAACAAGTTGTACTACATGGATGGCTTCAATTTGAGTTTCACTCAAGAAAGGTATGGCTTCGTGCAATGCAGTAGAGATCTCACAAATGATGGGTGCAGAGAGTGTTTGGAGGCCATGTTAGCAGAAGTTCCCAAACTTTATGAGCAAAAATTAGGATGGTCCATTTGGTCTGGAACTTGTATGATAAAGTATGATGACTATATGTTCTACCTTCCTAACAACCAAACATCTTCAATTCCTGAGTCAAATCCCGAAACAGATGGGATTCGGCTATCATCATTTCATAAAATTCAAACTGAGGAAACATATTTGAACACTGACCTGCCTATAATCCCATTAATCACAGTCCTGCAGAGTACTAATAACTTTTCAGAAGCATCTAAATTGGGGGAAGGTGGATTTGGCTCCGTTTACAAGGGAATTCTACCTGATGGAAGACAAATAGCAGTCAAAAGGCTGTCAAAATTTTCTGGTCAAGGTTCAGAAGAGTTCAATAATGAAGTAATGTCTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTCTTTGCATGCTGCTTGGAGGAAAATGAAAAGATACTTGTATACGAGTATATGCCAAACGCAAGTCTGTACTCTCACCTGTTTGATGATGAGAAAAGAAAACAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTTTTATACCTTCATGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGATCATGACATGAATCCCAAAATATCAGATTTTGGATTAGCAAGGGCATTTGAAATTGGACAGTACCAAGCAAATACAAAGCGAGTAATGGGCACTTATGGATACATGGCTCCTGAGTACGCTATGCAAGGTTTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGTTCTAGAAACCATTTGTGCAAGAAAGAACAATGGATTCTATCTGTCAGAACATGGTCAAACTCTTCTTTTATATGCTTGGAGAACATGGTGTGAGGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCAAAGCCTGTGAAGTTGAGAAGTGCATACACATTGCTTTGTTGTGCGTTCAAGAAAATGCAACATACAGACCAACCATGTCAGATGTTGTTATGATGCTAGGGAGTGACAACATGACGCTTCCAAAACCCAAGCACCCAGCATTTTCAGTTGGAAGAAAGGTGTCAGAGGAAGTACCAAAATCAAAAAGATCCAAGAATCTTTGTAGTACTGATGTAACAATCTCTATTACTTTACCAAGTCTTTTGTTTTGTTCTGCTGCCAAAGAGATTCTGCTTTCTGCACCATAG 1896 0.3945 MGTQLNVRSMCFGFLLSLSFSCFTYTQQTPIYQGSYCQNTTQESLTTAYRTNLERILSWMSSDAATSKGYNYTSIGNNTTVYGLYNCRGDVVGYFCQFCVSNAAREVPQHCPNRVSAIVWYDFCILRYSNENFFGKILTYPTWHAVGTKNISNKEETKKGEDFMRSLIRKATVETNKLYYMDGFNLSFTQERYGFVQCSRDLTNDGCRECLEAMLAEVPKLYEQKLGWSIWSGTCMIKYDDYMFYLPNNQTSSIPESNPETDGIRLSSFHKIQTEETYLNTDLPIIPLITVLQSTNNFSEASKLGEGGFGSVYKGILPDGRQIAVKRLSKFSGQGSEEFNNEVMSIAKLQHRNLVRLFACCLEENEKILVYEYMPNASLYSHLFDDEKRKQLDWKLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEIGQYQANTKRVMGTYGYMAPEYAMQGLFSVKSDVFSFGVLVLETICARKNNGFYLSEHGQTLLLYAWRTWCEGKCLELMDPMLEKSFKACEVEKCIHIALLCVQENATYRPTMSDVVMMLGSDNMTLPKPKHPAFSVGRKVSEEVPKSKRSKNLCSTDVTISITLPSLLFCSAAKEILLSAP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02081 631 CDD STKc_IRAK 304 569 - -
Phco9g02081 631 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Phco9g02081 631 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 264 373 - -
Phco9g02081 631 Gene3D Phosphorylase Kinase; domain 1 263 373 - -
Phco9g02081 631 FunFam Cysteine-rich receptor-like protein kinase 28 33 132 - -
Phco9g02081 631 ProSiteProfiles Gnk2-homologous domain profile. 31 133 IPR002902 -
Phco9g02081 631 Gene3D Transferase(Phosphotransferase) domain 1 374 579 - -
Phco9g02081 631 Pfam Salt stress response/antifungal 155 242 IPR002902 -
Phco9g02081 631 Pfam Salt stress response/antifungal 37 130 IPR002902 -
Phco9g02081 631 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Phco9g02081 631 Pfam Protein tyrosine and serine/threonine kinase 302 568 IPR001245 GO:0004672|GO:0006468
Phco9g02081 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Phco9g02081 631 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 602 - -
Phco9g02081 631 FunFam Cysteine-rich receptor-like protein kinase 10 142 244 - -
Phco9g02081 631 SUPERFAMILY Protein kinase-like (PK-like) 280 569 IPR011009 -
Phco9g02081 631 Gene3D - 142 244 IPR038408 -
Phco9g02081 631 Gene3D - 31 133 IPR038408 -
Phco9g02081 631 FunFam cysteine-rich receptor-like protein kinase 10 374 576 - -
Phco9g02081 631 ProSiteProfiles Protein kinase domain profile. 298 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02081 631 SMART serkin_6 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02081 Phco-Chr9 45886796 45890746 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g02081 PK_Tyr_Ser-Thr 3.2e-47 CL0016