Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02080 ATGGGAAAAACACAACTGAATGTGAGATCACTATGTTTTTTTGTTTTCATATTCTTGCTAAGCTTGAAATCACTAGTTACCAAAGCACAACCACCCTTTTATTTGGGAGATGACTGTGATTTCACCCCCCAAAAGCCTCTCAGCAATGCATACAAAACCAACATTAACAACATCCTCTCATGGCTATCCTCAGATGCAGCCACAAGCAAAGGCTATAACTACAAAACCATAGGAAACAACACCCCTGTGTATGGCCTCTATGACTGCCGTGGTGATGTGGTTGGATACTTCTGCCAATTCTGTGTCTCTGCTGCTTCCAGAAGACTCCTTCAGCACTGCCCTAATAGGTTCTCTGCTGTCATGTACTACAACTTCTGCATTCTCAGGTACTCTAATGAGAACTTCATTGGGAATGTTACAATAAACCATCCAAGGCATCATGTTGGGAACAAAAGTGTGTCCAGTGTAGAAGAGATTCAAAAGGGTGAGGATTTCATGAGAAGTTTGATCAGAAAAGCAACTGTTGAGACCAACCAGCTTTACTACATGGATGGCTTCAATTTGAACTCCACTCAGAGAAGGTACGGCTTGGTGCAGTGCACCAGAGATCTCACCAGTGAGAAGTGCAGACAGTGCTTGGAGGCCATGCTAGCACAAGTTCCCCAATGTTGTGAACAAAAGTTGGGGTGGCTTGTAGGAACTGCAAGTTGTCACATAAAGTATGATGATTATATGTTCTACCTTTTCAACAATCAATCATATATTTTGCCTGGGTTAACAGCTAAACAAGGAGATGGTAGTAAGTCAAGAAACTTGATCATTGGATTGAGTGTGGTGGGGTTAGCAGCTCTGTGTTTGAGTGTATATTGCTTATGTTACTGGAATAGAGTTAGAAAAGATGGGCTCATAAATGATACTATTCCTCTTTCTGCATATACAAATTTGCCTATAATTCCATTAACCACAATTCTTGAGAGTACTGATAACTTCTCAGAAACATCTAAGTTAGGTGAAGGTGGATTTGGCCCAGTTTACCAGGGAATTCTACCGGATGGAAGAGAAGTTGCAGTGAAAAGGCTCTCAAAAGTTTCTAGTCAAGGCTCAGAGGAGTTTAAGAATGAAGTAACATTTATAGCTAAATTGCAACATTGCAACCTTGTAAGACTTGTGGCATGCTGCTTGGAGGAAAATGAAAAGATACTTGTATATGAGTATTTGTCAAATGCAAGTCTTGATTTTCACCTATTTGATGATGAAAAAAGGAAGCAACTTGATTGGAAACTAAGGTCAAGCATTATCAATGGAATAGCAAGAGGTCTTTTATATCTTCATGAAGACTCTAGACTCAAGGTAATCCACAGAGATCTCAAAGCTAGCAATGTTCTGTTAGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAAATGGTCAGAACCAGGCAAATACAAACCGAATAATGGGAACTTATGGATACATGGCTCCGGAGTATGCTATGGAAGGATTGTTTTCAATGAAATCTGATGTTTTCAGCTTTGGAGTACTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTTTTTCTATCAGAACATGGTCAAAGTCTTCTTTTATATAGTTGGAGAATGTGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCATTGTTAGAAAATTCCTACACATCCAATGAAGTTGAGAAGTTTATACAGATTGGTTTACTGTGTGTTCAAGAAGCAGCAACAATTAGACCAACCATGTCCACTGTCATGGTATTGTTGGCAAGTGATGTGATGAGCATTCCAAAACCCAACAAACCTGCATTCTCAGTTGGAAGAGTGGAAATGTCTGCTTCAAAAAGTTCCAAAAATATTTCCATTAATGATGTATCAATCTCTAGTATTGTACCAAGGTAA 1938 0.3896 MGKTQLNVRSLCFFVFIFLLSLKSLVTKAQPPFYLGDDCDFTPQKPLSNAYKTNINNILSWLSSDAATSKGYNYKTIGNNTPVYGLYDCRGDVVGYFCQFCVSAASRRLLQHCPNRFSAVMYYNFCILRYSNENFIGNVTINHPRHHVGNKSVSSVEEIQKGEDFMRSLIRKATVETNQLYYMDGFNLNSTQRRYGLVQCTRDLTSEKCRQCLEAMLAQVPQCCEQKLGWLVGTASCHIKYDDYMFYLFNNQSYILPGLTAKQGDGSKSRNLIIGLSVVGLAALCLSVYCLCYWNRVRKDGLINDTIPLSAYTNLPIIPLTTILESTDNFSETSKLGEGGFGPVYQGILPDGREVAVKRLSKVSSQGSEEFKNEVTFIAKLQHCNLVRLVACCLEENEKILVYEYLSNASLDFHLFDDEKRKQLDWKLRSSIINGIARGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFENGQNQANTNRIMGTYGYMAPEYAMEGLFSMKSDVFSFGVLVLEIICGKKNSGFFLSEHGQSLLLYSWRMWCAGKCLELMDPLLENSYTSNEVEKFIQIGLLCVQEAATIRPTMSTVMVLLASDVMSIPKPNKPAFSVGRVEMSASKSSKNISINDVSISSIVPR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02080 645 SUPERFAMILY Protein kinase-like (PK-like) 305 601 IPR011009 -
Phco9g02080 645 FunFam Cysteine-rich receptor-like protein kinase 28 35 134 - -
Phco9g02080 645 Gene3D - 146 246 IPR038408 -
Phco9g02080 645 Gene3D - 39 135 IPR038408 -
Phco9g02080 645 ProSiteProfiles Protein kinase domain profile. 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02080 645 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Phco9g02080 645 FunFam Cysteine-rich receptor-like protein kinase 10 145 246 - -
Phco9g02080 645 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
Phco9g02080 645 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 641 - -
Phco9g02080 645 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
Phco9g02080 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 302 405 - -
Phco9g02080 645 Gene3D Phosphorylase Kinase; domain 1 302 405 - -
Phco9g02080 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Phco9g02080 645 Pfam Salt stress response/antifungal 47 132 IPR002902 -
Phco9g02080 645 Pfam Salt stress response/antifungal 164 244 IPR002902 -
Phco9g02080 645 SMART serkin_6 330 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02080 645 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Phco9g02080 645 FunFam Liguleless narrow1 406 609 - -
Phco9g02080 645 CDD STKc_IRAK 336 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02080 Phco-Chr9 45875470 45878479 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g02080 PK_Tyr_Ser-Thr 7.3e-47 CL0016