Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02073 ATGTCTGAAGAATCACTGAGTATTGTGGTGATCCACTATGCATTAAGAGACTTCAACACAAGTGCAATAAAAGTGGTCATGCAGGGATTTTCACTCGGTCACGGAGACAAGCTTACACTTCTTGTAATTCTTCGCCAAGCTTATAGTCCCACTAGGCTTCCCTTCATTGCACCTGCCAGATTGCGTGGATTATTTGAGAGTGATCACAAAATTGTTGAGGAAGAAGTTGCTAAGAAGAAAGAAGAGCTTCTTAATAATGCAAGCATAAGGGAAATTTCTGAGCAGTGTGAAGCAGACAGGATCCAATTCCAGATTGAAGTTCTTCAGGGCAAATTACCAGAGGTTGCTATAAATGCTGCCATCCGTTTGGAGGCAACATCAGTTATACTTGATAGACAGATGAAGAAATATAAGAAGGAATTGAAGCAGAGTCTCTTTTGTTCTTTGCTGATAATGAAACGTGACAACTCTATGCAACACTTGAGAGGGCCAAGGAACACACATCAGTGTGATAGAACCAATGGAAATGCAAGATGTGTTAGATGTCCTAAATCTAAATCTCCTCCAAGAATACGGCAGGTGACAAATTCATGCTCCAATACCAGCTCTTCATTTCCTACTCTGGAGAAGTTTGGGTGCCCCGAACTTTATTCTCAAATAAAACTAATCTCTGAAAATAGAGAAGACATGGCAAGAGGATATTGCCTACTACCCTTTACTGATACTCAAAAGTCTAATCATACTGAAGTGTATCACATAGAAGCACCACCAGAACATAGCAACAACCATGAAGCATATCAAATAGTTGAACAATTCCAAAATTCTGTTTGCTCAGTATGCAAGAACAGAAGACCAAAATTTGAAGTGATGAAAGAATTCACATACGCGGAGCTGCATGAAGCTACACAAGGTTTTTCACCAAAAAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGAATGCTGCAAGGAGGCCTAAGGATTGCTGTTAAGCAACATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAATTCAAATCTGAGGTCAATGCACTCAGCAGAGCCATACATGAGAATGTGGTCATGCTGCGTGGATTTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTTGTTTGCAATGGCTCTCTTGACCAACATTTATCACAACACTCACGTAAGCCTCTTACTTGGGGAGAAAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGTTTATTGTTCTTGCATCAGAACAATATAATACACCGAGATATGAGGCCTAGCAACATCCTTGTTACACATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATGTTGTTGGAACTATAGGGTATTTGGCACCAGAATATGCAGAATCAGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTCGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGTAGACAAACGTCTTGGCGAAAAAAGTCTAGTGGGATGGGCTAGGCCACTACTTAAAGAAAGAAACTATCCAGATCTAATTGATGAAAGGATGATGGATAATCATGATTGCCATCAGCTTTTCTGGATGATTCGTCTAGCAGAAAAATGCCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGATACAGTGGTCATTGCCTTAACTCATATACTGGAAGGCAACACATGCAGTGTTGTACTAAGAGACTGCTCTCCAGCACAGTCAGATTCATCCTATGATATGTCAGACTTGCTTATCTCAGATACCTCTCAGGAGATAGAAGGTGAAGATGCAAGCATCTATGCAGCATATGCTCCTATTTGCTTAAGACCTCCACCATCTCCTCCACTTGGAAGCACATCCTCAAGCACATCAAGCATGTTCACAGGGCTCAGTGAATCTCCTTTAGATGATTTGTCCAATAATGAGAATAAGGGTAAAAGGGCAAATGAACAAGGTGGGATACTCTAA 2013 0.4083 MSEESLSIVVIHYALRDFNTSAIKVVMQGFSLGHGDKLTLLVILRQAYSPTRLPFIAPARLRGLFESDHKIVEEEVAKKKEELLNNASIREISEQCEADRIQFQIEVLQGKLPEVAINAAIRLEATSVILDRQMKKYKKELKQSLFCSLLIMKRDNSMQHLRGPRNTHQCDRTNGNARCVRCPKSKSPPRIRQVTNSCSNTSSSFPTLEKFGCPELYSQIKLISENREDMARGYCLLPFTDTQKSNHTEVYHIEAPPEHSNNHEAYQIVEQFQNSVCSVCKNRRPKFEVMKEFTYAELHEATQGFSPKNYLSEGGFGSVYKGMLQGGLRIAVKQHKCASLQGEKEFKSEVNALSRAIHENVVMLRGFCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLTWGERIKVAIGAAKGLLFLHQNNIIHRDMRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTVDKRLGEKSLVGWARPLLKERNYPDLIDERMMDNHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVIALTHILEGNTCSVVLRDCSPAQSDSSYDMSDLLISDTSQEIEGEDASIYAAYAPICLRPPPSPPLGSTSSSTSSMFTGLSESPLDDLSNNENKGKRANEQGGIL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02073 670 MobiDBLite consensus disorder prediction 627 670 - -
Phco9g02073 670 ProSiteProfiles Protein kinase domain profile. 305 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g02073 670 PANTHER OS01G0253100 PROTEIN 207 572 - -
Phco9g02073 670 FunFam Proline-rich receptor-like protein kinase PERK8 267 380 - -
Phco9g02073 670 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 381 583 - -
Phco9g02073 670 SUPERFAMILY Protein kinase-like (PK-like) 290 578 IPR011009 -
Phco9g02073 670 ProSitePatterns Tyrosine protein kinases specific active-site signature. 422 434 IPR008266 GO:0004672|GO:0006468
Phco9g02073 670 Gene3D Phosphorylase Kinase; domain 1 265 380 - -
Phco9g02073 670 Gene3D Transferase(Phosphotransferase) domain 1 381 584 - -
Phco9g02073 670 MobiDBLite consensus disorder prediction 633 653 - -
Phco9g02073 670 Pfam Protein tyrosine and serine/threonine kinase 309 565 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02073 Phco-Chr9 45747507 45753583 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco9g02073 PK_Tyr_Ser-Thr 1e-45 CL0016