Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01992 ATGGCTACCATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCTCAGGCTTTGAACCATGCCCAACATCACGTGACAAATCTCAAAATCATAATAATAACAATGTCATATTGGTACTTTTACCCACTAGTTTGGGCATTTTCATGCTAGCATTATTTGTCTTTGGAGTCTCATATCATCTTTGTAGAAGGTCAAAGACAAAAGAACATCCGAATGCAGAATCATCAGGCCAAAATCTTTTTGCGATATGGAATTTTGATGGACAGATGGTGTATGAGAACATAATTGAAGCCACAGAAGGGTTTGACAATAAACATCTCATTGGAGTTGGAGGACAAGGAAGTGTTTACAAAGCTGAACTGCAAACAAATCAAATTGTTGCTGTTAAGAAATTCCATTCAGTACAAAATGGAGAAATGTCCAGTGTTAAAGCTTTCAAAAGTGAAATTCAAGCTTTGACAAAGATTCGACATCGTAACATTGTGAGGCTATATGGGTTTTGTTCTCATTCTCGATTCTCATTTTTGGTGTATGAGTTCTTGGAAAAGGGGAGCATAGATAATATTTTAAAAGATGATGAACAGGCAATTGCATTTAATTGGAATAAGAGGATTGATGCCATTAAAGGTGTAGCAAATGCTTTATTCTATATGCATCATGATTGTTCACCTCCAATCGTTCATCGAGATATATCAAGCAAGAATGTTCTTTTGAATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAGCTTCTTAATCCTAATTCAACCAATTGGACCTCATTTGTGGGAACTTTTGGATATGCTGCTCCAGAACTTGCATACACGATGGATGTGAATGAAAAATGTGATGTGTACAGCTTTGGGGTATTGGCACTAGAAATACTTTTTGGTGAGCACCCTGGAGAATTTATACCTTTGTTACTGTCTACATCCAATGCCATGGATTCAACACTTGATATTCCTTCGTTGATGGGTAAGTTAGATCAACGTCTCCCATACCCTACAAATATTGCTAAGGAGATAGCTTTGATTATAAGGATAGCAAATGCTTGCTTGACTGAAAGTCCTAGTTCTCGTCCTACCATGGAGCAAGTTGTCAACTACTCTTCAGTGTAG 1134 0.373 MATIEALRNNKGLCGNVSGFEPCPTSRDKSQNHNNNNVILVLLPTSLGIFMLALFVFGVSYHLCRRSKTKEHPNAESSGQNLFAIWNFDGQMVYENIIEATEGFDNKHLIGVGGQGSVYKAELQTNQIVAVKKFHSVQNGEMSSVKAFKSEIQALTKIRHRNIVRLYGFCSHSRFSFLVYEFLEKGSIDNILKDDEQAIAFNWNKRIDAIKGVANALFYMHHDCSPPIVHRDISSKNVLLNLEYVAHVSDFGTAKLLNPNSTNWTSFVGTFGYAAPELAYTMDVNEKCDVYSFGVLALEILFGEHPGEFIPLLLSTSNAMDSTLDIPSLMGKLDQRLPYPTNIAKEIALIIRIANACLTESPSSRPTMEQVVNYSSV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01992 377 FunFam Leucine-rich repeat receptor protein kinase MSP1 66 182 - -
Phco9g01992 377 ProSiteProfiles Protein kinase domain profile. 104 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01992 377 Pfam Protein kinase domain 105 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01992 377 Gene3D Phosphorylase Kinase; domain 1 64 182 - -
Phco9g01992 377 ProSitePatterns Tyrosine protein kinases specific active-site signature. 228 240 IPR008266 GO:0004672|GO:0006468
Phco9g01992 377 FunFam MDIS1-interacting receptor like kinase 2 183 376 - -
Phco9g01992 377 SUPERFAMILY Protein kinase-like (PK-like) 88 374 IPR011009 -
Phco9g01992 377 Gene3D Transferase(Phosphotransferase) domain 1 183 376 - -
Phco9g01992 377 PANTHER LEUCINE RICH REPEAT KINASE 2 2 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01992 Phco-Chr9 44891899 44893116 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco9g01992 Pkinase 1.8e-49 CL0016