Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01987 ATGTCCATTTCTGCTTCAATTATTGCACACTTTAGCCACCTCATTCAATTTCCATCCACCTTAAAATTGGGTTCCACAACCACAAATCCAATTGGGTTGCTAGTAGTACTCACTACTAGGTGTACTGAAAGATCAGGTTTTTCGGTGGAACAAGGAGAACCACCCTCCATGTTGATACTAGTTCTTGGACTAGCTTCAGCTACTCTTTTAGTGATTGTTGCAGGTTATGTGTTGTTTTGCAAGAGAAGAGTGTCAGGATATGAGAGTAAGGACATTGAAAGCTCAGAACACAAGGAGGAGGAGGTGGCTCTGAAGGAGGATTTGATGATCTTTCAAGGTGGGGAGGACCTTACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAACTATGGAACACTGTATAAGGCCTTGTTGCAGAGGAGCAACAAGGTGAGGCTGCTCAGGTTTCTGAGGCCTGTGTGCACTGCAAGAGGTGAAGAATTGGACGAGATGATTCAGTTTCTTGGAAGGATAAGGCATCCTAACTTGGTTCCTCTTCTGGGGTTTTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTATAGACATGGGAATCTCACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCAAACATATGTAGAATATCCATTGGAATTGTCAAAGGATTGGAGCATCTTCACACATCACAGGAGAAGCCAATTATCCATGGAAACCTCAAGTCTAAAAACATCCTCTTGGACCGCTCCTACCAGCCCTACATCTCTGATTCTGGCTTACATCTTCTGCTGAATCCTACTGCTGGCCAAGAAATGCTTGAAAGTTCAGCAGCTCAGGGCTACAAGGCACCTGAGCTCATCAAAATGAAGGATGCTAGTGAGGAGAGTGATATATATAGCCTCGGTGTGATCTTGCTGGAACTGCTTTCAGGAAAGGAACCTATCAATGAGCACCCTACTCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCAGTCCTTGGACACAGAGTTGCTGATTTATACCACCCTGCCATTCTTCTCAGAAACAGCACAGAGGATAGTATTCCAGTCACAGAAGAATTCATTCTCAAAGTTTTTCAACTTGCCATGGCTTGTTGCTCCCCTTCACCCTCAGTTAGACCTAACATAAAGCAAGTCCTCAAGAAACTTGAAGAAATTATGTTCTAG 1230 0.4341 MSISASIIAHFSHLIQFPSTLKLGSTTTNPIGLLVVLTTRCTERSGFSVEQGEPPSMLILVLGLASATLLVIVAGYVLFCKRRVSGYESKDIESSEHKEEEVALKEDLMIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTARGEELDEMIQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNICRISIGIVKGLEHLHTSQEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDASEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRVADLYHPAILLRNSTEDSIPVTEEFILKVFQLAMACCSPSPSVRPNIKQVLKKLEEIMF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01987 409 Gene3D Transferase(Phosphotransferase) domain 1 203 409 - -
Phco9g01987 409 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 92 407 - -
Phco9g01987 409 SUPERFAMILY Protein kinase-like (PK-like) 127 405 IPR011009 -
Phco9g01987 409 Pfam Protein tyrosine and serine/threonine kinase 128 404 IPR001245 GO:0004672|GO:0006468
Phco9g01987 409 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01987 409 Gene3D Phosphorylase Kinase; domain 1 120 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01987 Phco-Chr9 44833718 44836154 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco9g01987 PK_Tyr_Ser-Thr 1.3e-30 CL0016