Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01930 ATGGCTTGCAGTGCAGAAAGAAAACCTCATGCGTTGCCACTTCTGACCTACCTCTTGTTGTGGTGGTGGACTACTTGTGTCCATGGTGAAGCCACAAGAAATTCTTTGAAGCCAGGGGATACGTTGAATGCAACAGAAGGGGCCAAACTATGTTCAGAAAAGGGTAACTACTGCATGTACTTTGTTGGCTCAACATTTGATGATCCGAATGAAGCTAACTTATATATATATGCTCAAAAGAATGTTTGGGCTGTGTGGGTTGCTAATAGAGACCAAACTGTTGACATAGATTCTGCAGTTCTATCATTGAATCATTCTGGGGTACTCAAAATAGCATCTCAACATGCAGAAATCATCCTTTATTCACCACCTCAAGCTATCAACAACACTGTGGCTACACTGTTGGACACAGGTAACTTTGTGCTTCAGCAACTTCACCCCAATGGATCTGCAATTGGTGTGTTGTGGGAAAGTTTTGATTTTCCCACAGACACTTTGCTCCCAGGGATGAGGTTAGGTGTGAATCACAAAACTGGTGGTAAATGGTCTCTGGTTTCATGGCTGAGTAAAGAACTTCCTACTCCTGGTCCATTCAGGCTTGAATGGGAGCACAAAACAAAACAGTTGAACATCAAGAAAGGAGAAAAGCTTTACTGGGCTGCTGGTGAAAACCAGTTGAAGCACATCTTGGGGAAGGCTTATCACCATATTGTGTTTGTCTCAAATGAAAATGAAGCCTACATCACATTGAGGAGTTCAGATGAAGAGCTCACAGAATGGACACTGTTGTCCACTGGTCAACTGATGAACCGAAATGGAGGTGATGTTGCAAGGGCTGATCTGTGTTATGGATACAACACAGATGGAGGGTGCCAAAAATGGGAGGATCTACCCTCGTGCAGAAATTCTGGTGATGCCTTTGAACTGAAGCAAGGTTATGCCAATTTTGACTTTGACACGAAAAAAGATGAAGCAAATTCAAGTTATGGCATAAATGATTGCCAAGCTATTTGCTGGAGCACCTGCAACTGTGTTGGATTCACTCATCTTTATAACAATGAAACTGGTTGTACCTTTCTGTGGAATTCAACCAAGGGTACCAATATTGCAAGCGAGGGTGAAAAGTTTTACATGATGGTAAAGAGCAACCATCACAAAAGTACACAAAAATGGATATGGGCAATTGTTGCAATAGGAGCAACTATACTCATAATCTGCCTTTGCCTTCTGTGTGGTAGAGTCTTAAGGAAAAGAAAATATGCTCTTGAAGAGCTTAAAGCTAAAAAAATGGGGATTGAGAATGATGATCTTGAAGCTTCCAATACATCTTCTTGTCCAGAAAAACTAGAAGTTTTTTTAAAGGATGAACATGACAAAGTTTTTAGTTATGCATCAATAGTGGAGGCCACAAATGACTTTTCATCTGAAAACAAGTTAGGACAAGGAGGTTTTGGACCAGTTTATAAGGGAATTCTACCTACAATGCAAGAAGTTGCTGTGAAAAAACTTTCAAAATCTTCCAGACAAGGTCTACTTGAATTTAAAAATGAATTAACAGTCATATCTAAACTGCAGCACACAAATTTGGTTCAGCTACTCGGTTACTGCATTCACGAAGACGAGAGGATTTTGATTTATGAGTATATGCCTAACAAAAGCTTGGACTTCATTTTATTTGATTGGACAAAAAATCAGTTGCTAGATTGGAATAAGCGTTTCAGTATAATAGAAGGAATTGCTCAAGGATTATTATACCTTCACAAATACTCAAGACATAGAATTATTCACAGAGACTTGAAGGCTAGCAACATACTCCTTGATGAGAATATGAACCCCAAAATTTCTGATTTTGGTATAGCAAAAATGTTCACACAACAGGATTCTGAATCAAATACCACCAGGATTGTTGGCACTTATGGTTACATGTCTCCTGAATATGCTATGGAAGGAGTTTTCTCAACAAAATCTGATGTGTATAGCTTTGGAGTGTTACTCTTTGAAATTGTTAGTGGTAAAAGAAACAATAGCTTCTACACTGATGAAAGACAACTCAATCTAGTAGGACATACATGGGAGCTATGGAAAGAAGGTGAGGTTCTTAAGTTGGTGGATCCATCACTGAATGATTCATTTTCAGAGGAAGAAGTGCTAAGATGTGTGCATGCTGGTCTTTTATGTGTGGAAGAAAATGCAGATGATCGCCCCTCCATCTCCAACATTCTATCTATGTTAACCAACAAAAGTAAAGTTACTACTGTGCCTAAAAAACCAGCATATTATGTTAGAACAAAAGTCCTTGGGGAAGAAACATCCACCAGAGATTTTGGTTTAGATTCTACACACGAGAATTCCCTTTATGTATCTTCAACTTGA 2373 0.3911 MACSAERKPHALPLLTYLLLWWWTTCVHGEATRNSLKPGDTLNATEGAKLCSEKGNYCMYFVGSTFDDPNEANLYIYAQKNVWAVWVANRDQTVDIDSAVLSLNHSGVLKIASQHAEIILYSPPQAINNTVATLLDTGNFVLQQLHPNGSAIGVLWESFDFPTDTLLPGMRLGVNHKTGGKWSLVSWLSKELPTPGPFRLEWEHKTKQLNIKKGEKLYWAAGENQLKHILGKAYHHIVFVSNENEAYITLRSSDEELTEWTLLSTGQLMNRNGGDVARADLCYGYNTDGGCQKWEDLPSCRNSGDAFELKQGYANFDFDTKKDEANSSYGINDCQAICWSTCNCVGFTHLYNNETGCTFLWNSTKGTNIASEGEKFYMMVKSNHHKSTQKWIWAIVAIGATILIICLCLLCGRVLRKRKYALEELKAKKMGIENDDLEASNTSSCPEKLEVFLKDEHDKVFSYASIVEATNDFSSENKLGQGGFGPVYKGILPTMQEVAVKKLSKSSRQGLLEFKNELTVISKLQHTNLVQLLGYCIHEDERILIYEYMPNKSLDFILFDWTKNQLLDWNKRFSIIEGIAQGLLYLHKYSRHRIIHRDLKASNILLDENMNPKISDFGIAKMFTQQDSESNTTRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLFEIVSGKRNNSFYTDERQLNLVGHTWELWKEGEVLKLVDPSLNDSFSEEEVLRCVHAGLLCVEENADDRPSISNILSMLTNKSKVTTVPKKPAYYVRTKVLGEETSTRDFGLDSTHENSLYVSST 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01930 790 ProSiteProfiles Bulb-type lectin domain profile. 33 155 IPR001480 -
Phco9g01930 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 188 IPR036426 -
Phco9g01930 790 SMART serkin_6 473 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01930 790 SMART blect_4 33 162 IPR001480 -
Phco9g01930 790 Gene3D Phosphorylase Kinase; domain 1 435 548 - -
Phco9g01930 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 549 752 - -
Phco9g01930 790 ProSiteProfiles PAN/Apple domain profile. 300 381 IPR003609 -
Phco9g01930 790 Gene3D Transferase(Phosphotransferase) domain 1 549 760 - -
Phco9g01930 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Phco9g01930 790 Pfam D-mannose binding lectin 85 187 IPR001480 -
Phco9g01930 790 CDD STKc_IRAK 479 746 - -
Phco9g01930 790 ProSiteProfiles Protein kinase domain profile. 473 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01930 790 Gene3D - 28 159 IPR036426 -
Phco9g01930 790 SUPERFAMILY Protein kinase-like (PK-like) 459 762 IPR011009 -
Phco9g01930 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 439 548 - -
Phco9g01930 790 Pfam Protein tyrosine and serine/threonine kinase 476 743 IPR001245 GO:0004672|GO:0006468
Phco9g01930 790 PIRSF SRK 279 790 IPR024171 GO:0004674
Phco9g01930 790 PIRSF SRK 6 277 IPR024171 GO:0004674
Phco9g01930 790 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 233 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01930 Phco-Chr9 44170678 44174826 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01930 PK_Tyr_Ser-Thr 8.5e-50 CL0016