Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01926 ATGAGGCTTATCCTTCACAAACTTCTGCTTGCTTTCATGCACCTCTGGTTGTGGTGGAGTTCTTCTAATCATGTTCATGTTGATGCAGCAGATGACAGTTTAAAGCCCGGTGATATATTCAACTCCTCTTCACAACTGTATTCTAAGAGTCGCAAATATTTTCTGGATTTTTATTCGATTCAAAGTCTGCATAAAGCTTTTACTTACTTAGCAATACATAGTGCATATGACACTACTGTAGTTTGGAAGGGTAATAGAGATCAAATTGTCCACCCGAGTGATCCAGTTCTATCCTTAAACTTCTCTGGCGTGCTGAAAATAGAATCTTCATCTCTGAAAAAACCAATTATTCTCTATTCTTCTCCTCAACCTATCAACAACACTGTGGCCACTTTGTTGGACACAGGCAACTTTGTGCTTCAACACCTTCACTCCAATGGGACAACCACTCTCTTGTGGCAGAGTTTTGATTATCCCACTGACACTTTGATCCCCACTATGAAGTTAGGTGTTAATCACAAAACAGGCCATCGTTGGTTACTTTATTCGCAGTTGACCTATGGGCGTGCGACTCCAGGTACCTTTAATCTTGAATGGGAACCGAGGGAACAAGAACTGGTGATAAGGAGGCGAGGAAAAGTTTGCTGGAAAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCAGAAGATGCACAAGGCGTGTTGAAGTACAGCATACTCTCCAATGGGGATGAAGACACCTTCTCTTTCACATCTACAAATGAAAGCCATACACGTTGGTGGTACCTATGGGATATTGGTCGGTTATCTTACAATGAGAAAGAGGGATACGTTGCAAGGGCTGATCTGTGTTATGGATACAACAACACAGATGGGTGCCAAAGATGGGAGGATATACCTAAATGCAGGATTCCTGGTGATGTCTTTACCAAAAAGAATCTTCGCCCTAATTATGAAAATTTCACCTTTGACATGAATCAGAATATTACTTACAGCGAGTGTGAGGCTGCTTGCTGGAGCGATTGTAATTGCAATGGATTCACAGAAATCTATGAAGATAGAAGTGGATGTAGATTCTATCATTGGAATTCATCAAAAGATTATATAGTTGACGGCACTGTTTCGGGTCAAGACATTTACTTACTTGAGAACAAAGGAAACATAATCGCTCATCGTCACGGTACAAAAAGGTGGATATGGATAACTACAGTAATAGCAGCTACTTTACTCATAATATGCGCATCCATTCTGTGCCTGGCAATAAAGAAACGAAAACATCTGCTTCAAGAGAAGAAAAGGAAAGAAATGAGTCTAATAGAAGATTTTGGAAATGATTTGAATAAGAAACACGGTTTAAAAGTCTTGGATTATACATTGGTTGTGGCAGCTACAAATGAGTTTTCATCAGATAATAAGATAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAACTTTGCCAACAGGAGAGGAGGTTGCTATTAAAAGACTTTCAAGAAGTTCTGCGCAAGGAATTGTTGAGTTTAAAAATGAACTAACACTAATATGTGAACTTCAGCACATGAATCTTGTTCAACTACTTGGCTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGCCCAACAAAAGCCTAGATTTCTATCTTTTTGATTGTACAAGAAGCAAATTACTCGATTGGAATAAGCGCTTCAACATAATACAAGGAATTGCTCAAGGATTATTGTATCTTCACAAGTACTCAAGACTCAAAGTCATTCATAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCTCGAATGTTTACTCAACAAGACTCGATATCAAATACAAACAGGGTTGTTGGGACATATGGTTATATGTCTCCAGAATATGCTATGGAAGGAATATTTTCTACAAAGTCTGATGTGTACAGCTTTGGAGTGTTGTTGCTTGAAATAGTTAGTGGAAGAAAAAACACAAGTTTTTATGATGATGACCACCCTTTAAATCTAGTTGGACATGTATGGGAATTATGGAAAGATGACAAGTATTTTGAATTAGTGGATCCATCATTAAACGAAGTATTTGATCATGAGGAAGTGCAAAGGTGTATTCATATTGGTCTCTTATGTGTTGAACATTATGCAAATGATCGACCCACAATGAGTGACATTATATCAATGTTGACAAGCAAAAGTCTAATAGTATCCTTACCTCAAAAACCAGCATTTTATGTTCAAAGGTACATGTATAAAGAGAATTTATCTTCCTTAGAATTGTGTACTGGTTCTACAGTATAG 2334 0.3775 MRLILHKLLLAFMHLWLWWSSSNHVHVDAADDSLKPGDIFNSSSQLYSKSRKYFLDFYSIQSLHKAFTYLAIHSAYDTTVVWKGNRDQIVHPSDPVLSLNFSGVLKIESSSLKKPIILYSSPQPINNTVATLLDTGNFVLQHLHSNGTTTLLWQSFDYPTDTLIPTMKLGVNHKTGHRWLLYSQLTYGRATPGTFNLEWEPREQELVIRRRGKVCWKSGKLRNNRFEHIPEDAQGVLKYSILSNGDEDTFSFTSTNESHTRWWYLWDIGRLSYNEKEGYVARADLCYGYNNTDGCQRWEDIPKCRIPGDVFTKKNLRPNYENFTFDMNQNITYSECEAACWSDCNCNGFTEIYEDRSGCRFYHWNSSKDYIVDGTVSGQDIYLLENKGNIIAHRHGTKRWIWITTVIAATLLIICASILCLAIKKRKHLLQEKKRKEMSLIEDFGNDLNKKHGLKVLDYTLVVAATNEFSSDNKIGQGGFGPVYKGTLPTGEEVAIKRLSRSSAQGIVEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDCTRSKLLDWNKRFNIIQGIAQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARMFTQQDSISNTNRVVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIVSGRKNTSFYDDDHPLNLVGHVWELWKDDKYFELVDPSLNEVFDHEEVQRCIHIGLLCVEHYANDRPTMSDIISMLTSKSLIVSLPQKPAFYVQRYMYKENLSSLELCTGSTV 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01926 777 Pfam PAN-like domain 318 362 IPR003609 -
Phco9g01926 777 Pfam Protein tyrosine and serine/threonine kinase 472 740 IPR001245 GO:0004672|GO:0006468
Phco9g01926 777 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Phco9g01926 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 432 544 - -
Phco9g01926 777 CDD STKc_IRAK 475 741 - -
Phco9g01926 777 Gene3D Transferase(Phosphotransferase) domain 1 545 748 - -
Phco9g01926 777 SUPERFAMILY Protein kinase-like (PK-like) 454 760 IPR011009 -
Phco9g01926 777 SMART serkin_6 469 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01926 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 545 748 - -
Phco9g01926 777 Gene3D - 25 156 IPR036426 -
Phco9g01926 777 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 130 756 - -
Phco9g01926 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Phco9g01926 777 PIRSF SRK 1 282 IPR024171 GO:0004674
Phco9g01926 777 PIRSF SRK 276 776 IPR024171 GO:0004674
Phco9g01926 777 SMART blect_4 37 159 IPR001480 -
Phco9g01926 777 Pfam D-mannose binding lectin 79 183 IPR001480 -
Phco9g01926 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 183 IPR036426 -
Phco9g01926 777 ProSiteProfiles Protein kinase domain profile. 469 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01926 777 Gene3D Phosphorylase Kinase; domain 1 425 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01926 Phco-Chr9 44106989 44110234 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01926 PK_Tyr_Ser-Thr 2.2e-50 CL0016