Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01924 ATGAGGCTTATCCTTCACAAACTTCTGCTTGCTTTCATGCACCTCTGCTTCTGCTTCAGTTCTTCCATTCATGTTGATGCAGCACATGACAGTTTAAACCCCGGTGATACATTCAATTCCTCTTCCCATCAACTATATTCTAAGAGTCGCAAATATTTTCTGCAATTTTATTCGGTTGGAGCTTTAGATTCAATTTTTACTTACTTAGCAATACAAAGTGCATACGACAATACTATCATTTGGGAGGGTAATAGAGAACAATCTGTCGACTGGAGCGATGCAGTTCTATCCTTAAACTTCTCTGGCGTGCTCAAAATAGAATATCCATCTATGAAACAACCAATTATTCTCTATTCTCCTCCTCAACCTATCAACAACACTGTGGCCACTTTGTTGGACACAGGCAACTTTGTTCTTCAACACCTTCACTCCAATGGGACAAACACTCTCTTGTGGCAGAGTTTTGATTATCCCACTCACACGTTGATCCCCACCATGAAGTTAGGTGTTAATCACAAAACAGGCCATCGTTGGTTACTTTTTTCGCAGTTGACCAATGTGCGTGCGACTCCAGGTGCCTTTAGTCTTGAATGGGAACCGAGGGAACAAGAACTGGTGATAAGGAGGCGAGGAAAAGTTTGTTGGAAAAGTGGGAAACTAAGGAACAATAGATTTGAGAACATTCCAGAAGAAGCACAAGGCGTGTTGAAGTACAGCATAGTGTCCAATGGGGATGAAGACACCTTCTCTTTCACATCTACAAATGAAAGCCATACACGTTGGTGGTCCTTATCGGATAGTGGGCGGTTATCTTACAATTACAATGAGAGATACGTTGCAAGGGCTGATCTGTGTTATGGATACAACAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCTAAATGCAGGATTCCTGGTGATGTCTTTACCAAAAAGAATCTTCGCAATAATTATCAAAATTTAACCTTTGACAATAATAAGAATATTAGCTACAGCGATTGTGAGGCTGCCTGCTGGAGCGATTGTTATTGCAATGGATTCGCACAAAACTTTGATGATGGAAGTGGATGTAGATTCTATCATTGGAATTCATCAAAAGATTATATAGTTGACGGCACTGTCTCGGGTCAAGACATTTTTTTACTTGAGAACAAAGGGAACATAATCCCTCATCATCACGGTACAAAAAGGTGGATATGGATAAGTCCAGTAATAGCAACTACTTTACTCATACTATGCGCATCCATTCTATGTCTCGCCATAAAGAAACGAAAACAAGTGATTCAAGAGAAGAAAAGGAAAGAAATGAGTCTAATCGAACATTTTGGAAATGATTTGAATAAGAAAAACGGTTTAAAAGTATTGGATTATACATTGGTTGTGGCAGCTACAAATGAGTTTTCATCAGAGAATAAGTTAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAACTTTGCCAACTGGAGAGGAGGTTGCTATAAAAAGACTTGCAAGAAGTTCTGCACAAGGAATTGTTGAGTTTAAAAATGAACTAACACTTATATGTGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGTTGTATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGATTGTACAAGAAGCAAACTACTAGATTGGAATAAGCGCTTCAGCATAATACAAGGAATTGCTCAAGGATTATTGTATCTTCACAAGTACTCAAGACTCAAAGTTATTCATAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTACTCAACAAGACTCGATATCAAATACGAACAGGGTTGTTGGAACATATGGTTACATGTCTCCAGAATATGCTATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTACAGCTTAGGAGTTTTGTTGCTTGAAATAGTTAGTGGAAGAAAAAACACAAGTTTTTATGATGATGATCACCCTTTGAATCTAGTTGGACATGTATGGGAATTATGGAAAGATGACAAGTATTTTGAATTAGTGGATCCATCATTAAATGAGGTATTTGATCATGAGGAAGTGCAAAGGTGTATTCATATTGGTCTCTTATGTGTTGAACATTATGCAAATGATCGACCCACAATGAGTGACATTATATCAATATTGACAAGCAAGGGTCCAATAGTGTCCTTACCTCAAAAACCAGCATTTTATATCCAAAGGTATAATTATAATGAGAATTTATCTTCCTTAGAATTGTGTACTGGTTCTACAGTAGAGATTACTTCTTCTACCGTAGAAATGACTACTTCTACCTGA 2373 0.3767 MRLILHKLLLAFMHLCFCFSSSIHVDAAHDSLNPGDTFNSSSHQLYSKSRKYFLQFYSVGALDSIFTYLAIQSAYDNTIIWEGNREQSVDWSDAVLSLNFSGVLKIEYPSMKQPIILYSPPQPINNTVATLLDTGNFVLQHLHSNGTNTLLWQSFDYPTHTLIPTMKLGVNHKTGHRWLLFSQLTNVRATPGAFSLEWEPREQELVIRRRGKVCWKSGKLRNNRFENIPEEAQGVLKYSIVSNGDEDTFSFTSTNESHTRWWSLSDSGRLSYNYNERYVARADLCYGYNNTDGGCQRWQDIPKCRIPGDVFTKKNLRNNYQNLTFDNNKNISYSDCEAACWSDCYCNGFAQNFDDGSGCRFYHWNSSKDYIVDGTVSGQDIFLLENKGNIIPHHHGTKRWIWISPVIATTLLILCASILCLAIKKRKQVIQEKKRKEMSLIEHFGNDLNKKNGLKVLDYTLVVAATNEFSSENKLGQGGFGPVYKGTLPTGEEVAIKRLARSSAQGIVEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDCTRSKLLDWNKRFSIIQGIAQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARMFTQQDSISNTNRVVGTYGYMSPEYAMEGVFSTKSDVYSLGVLLLEIVSGRKNTSFYDDDHPLNLVGHVWELWKDDKYFELVDPSLNEVFDHEEVQRCIHIGLLCVEHYANDRPTMSDIISILTSKGPIVSLPQKPAFYIQRYNYNENLSSLELCTGSTVEITSSTVEMTTST 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01924 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 432 544 - -
Phco9g01924 790 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 130 765 - -
Phco9g01924 790 Pfam Protein tyrosine and serine/threonine kinase 472 739 IPR001245 GO:0004672|GO:0006468
Phco9g01924 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 184 IPR036426 -
Phco9g01924 790 CDD STKc_IRAK 475 741 - -
Phco9g01924 790 SUPERFAMILY Protein kinase-like (PK-like) 455 765 IPR011009 -
Phco9g01924 790 Gene3D Phosphorylase Kinase; domain 1 424 544 - -
Phco9g01924 790 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Phco9g01924 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 545 747 - -
Phco9g01924 790 ProSiteProfiles Protein kinase domain profile. 469 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01924 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Phco9g01924 790 Gene3D - 23 155 IPR036426 -
Phco9g01924 790 PIRSF SRK 275 790 IPR024171 GO:0004674
Phco9g01924 790 PIRSF SRK 1 282 IPR024171 GO:0004674
Phco9g01924 790 SMART serkin_6 469 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01924 790 SMART blect_4 36 158 IPR001480 -
Phco9g01924 790 Gene3D Transferase(Phosphotransferase) domain 1 545 745 - -
Phco9g01924 790 Pfam D-mannose binding lectin 78 182 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01924 Phco-Chr9 44080092 44083300 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01924 PK_Tyr_Ser-Thr 2.2e-49 CL0016