Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01919 ATGGACACTTTGATCCCCACCATGAAGTTAGGTGTTAACCACAAAACAGGCCATCATTGGTTACTGGTTTCATATTTTACCAAAACACTTTTCATTCCCGGTGCCTTTAGCCTTGAATGGGAACCTGTGGAACAAGAATTGATCATAAAGAGACGGGGAAAAGTTTGTTGGAAAAGTGGGAAACTGAGGAACAATAAATTTGAGCACATTCCAGAAGATGCACAAGGCGTGTTGAAGTACAGCATAGTCTCCAATGGGGATGAAGACACCTTCTCTTTCACATCTACAAATGAAGATCCTGACCTACAGTGGACTTTGACAGAAATTGGACAGATATCTGGTGGTGAAGGATATGTTGCTAGGGCTGATTTGTGTTATGGATATAACAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAATGACTGGTTTCGTCAATTATCAGAATGTAACTTTTGAAGGAAATATAAGTTATTCTTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTGATTGCAGTGCATTCAGAAAATTGTATCCTAATGGAACTGGATGTGTATTCTTTCACTGGAGTTCCGCGGAAAGTTATACGTCTGATAGTACTGGTATAAGCTTTTACTTGCTGGTGAACATGTTAACTCATCATAAGAGTACAAAAAAGTGGACATGGATAGGTCCAGTAGCAGCAACTGCTCTACTTGCAATGTGCCTATTCACTATTTGCCTAGCCTTAAAGAAACGAAAATTCGTGTTTCAAGAGAAGAAAAGGCAAAGGATGGTGATGAAGATGGTACATTTGGCAACTTGTAGTCGGTCATCTGCAATGGAAGATATTGAAGTTGATTTAAAAACGGGAAGTGGCCTAAAATTGTTTAATTATACATCAGTTATGGTAGCAACAAATGGATTTTCATCTGAGAATAAGTTAGGACAAGGAGGTTTTGGACCCGTTTATAAGGGAATTCTTCCAACAGGCCAAGAGATTGCTGTAAAAAGACTTGCAAAAACATCTGGACAAGGAATTGTGGAGTTTAAGAATGAACTAACACTAATATGTGAACTTCAGCATATGAATCTTGTGCAACTACTTGGTTGTTGCATTGACGAAGAAGAGAGGATTCTAATTTATGAGTATCTGCATAATAAAAGTTTGGATTTCTATCTATTCGATTGTACAAGAGGCAAATTACTAGATTGGAAGAAGCGGTTCAAAATAATAGAAGGAATTTCTCAAGGATTACTTTATCTTCATAAGTACTCAAGACTCAAAATCATCCATAGGGACTTGAAAGCTAGCAATATTCTTTTAGATAAAAATATGAATCCAAAAATATCAGATTTTGGGATGGCAAGAATATTCACACAAGAATCAGTCTCAAATACCAACAGAATTGTTGGGACACATGGTTACATGTCTCCAGAATATATGATGGAAGGAGTTTTCTCTACAAAGTCTGACGTTTATAGTTTTGGAGTTTTGCTACTTGAAATTGTTAGTGGAAGAAGAAGCCTTGGTTGTTATGGTGATGATCGCCCATTAAATTTGATAGGACATACATGGGAGTTATGGAAAGATGGTGCATCTTTAGAGTTAGTGGATTCATCAACAAAAGAGTCATTTGATCCTGATGAAGTGCAAAGATGCATTCATATTGGTCTCTTGTGCGTACAACATTATGCAGATGATCGACCAACCATGTTTGACATTGTATCAATGTTGACAAACAAAAGTGCAATAGTTTCCTTACCTGAAAGACCAGCATTCTACGTTGGAAGAAAGATCATTCATGATCAATTATCTTCAAAGGATTTTTGTACTAATTCTACAGTAGAGATTACAACATCTACAATTGACATGACAGATTCCTAA 1911 0.3736 MDTLIPTMKLGVNHKTGHHWLLVSYFTKTLFIPGAFSLEWEPVEQELIIKRRGKVCWKSGKLRNNKFEHIPEDAQGVLKYSIVSNGDEDTFSFTSTNEDPDLQWTLTEIGQISGGEGYVARADLCYGYNNTDGGCQRWQDIPKCRNPGDVFQKMTGFVNYQNVTFEGNISYSYSDCEASCWSNCDCSAFRKLYPNGTGCVFFHWSSAESYTSDSTGISFYLLVNMLTHHKSTKKWTWIGPVAATALLAMCLFTICLALKKRKFVFQEKKRQRMVMKMVHLATCSRSSAMEDIEVDLKTGSGLKLFNYTSVMVATNGFSSENKLGQGGFGPVYKGILPTGQEIAVKRLAKTSGQGIVEFKNELTLICELQHMNLVQLLGCCIDEEERILIYEYLHNKSLDFYLFDCTRGKLLDWKKRFKIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDKNMNPKISDFGMARIFTQESVSNTNRIVGTHGYMSPEYMMEGVFSTKSDVYSFGVLLLEIVSGRRSLGCYGDDRPLNLIGHTWELWKDGASLELVDSSTKESFDPDEVQRCIHIGLLCVQHYADDRPTMFDIVSMLTNKSAIVSLPERPAFYVGRKIIHDQLSSKDFCTNSTVEITTSTIDMTDS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01919 636 Gene3D Phosphorylase Kinase; domain 1 276 392 - -
Phco9g01919 636 SUPERFAMILY Protein kinase-like (PK-like) 301 614 IPR011009 -
Phco9g01919 636 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 200 629 - -
Phco9g01919 636 Pfam Protein tyrosine and serine/threonine kinase 320 587 IPR001245 GO:0004672|GO:0006468
Phco9g01919 636 Gene3D Transferase(Phosphotransferase) domain 1 393 596 - -
Phco9g01919 636 Pfam PAN-like domain 144 203 IPR003609 -
Phco9g01919 636 ProSiteProfiles Protein kinase domain profile. 317 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01919 636 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 393 595 - -
Phco9g01919 636 SMART serkin_6 317 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01919 636 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 282 392 - -
Phco9g01919 636 ProSiteProfiles PAN/Apple domain profile. 144 224 IPR003609 -
Phco9g01919 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Phco9g01919 636 CDD STKc_IRAK 323 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01919 Phco-Chr9 44018558 44021222 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01919 PK_Tyr_Ser-Thr 1.5e-47 CL0016